RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 RHOXF1Q8NHV9 184 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MCFD2Q8NI22 146 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 FBXO30Q8TB52 745 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 METTL6Q8TCB7 284 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 DYNC2LI1Q8TCX1 351 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRPM4Q8TD43 1214 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 BLOC1S5Q8TDH9 187 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZFP90Q8TF47 636 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAR1Q8WVX9 515 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PIK3R3Q92569 461 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 KCNJ9Q92806 393 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MYDGFQ969H8 173 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 FUBP1Q96AE4 644 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZHX1-C8orf76Q96EF9 292 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM120BQ96EK7 910 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 HMCESQ96FZ2 354 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PDLIM5Q96HC4 596 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CDKN2AIPNLQ96HQ2 116 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PYURFQ96I23 114 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ITCHQ96J02 903 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAGEB10Q96LZ2 347 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PPM1MQ96MI6 270 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF583Q96ND8 569 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 NSUN5Q96P11 429 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRIB3Q96RU7 358 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MBOAT4Q96T53 435 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC29A3Q9BZD2 475 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 DPY30Q9C005 99 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZCCHC2Q9C0B9 1178 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 DUSP21Q9H596 190 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SOX17Q9H6I2 414 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ELP3Q9H9T3 547 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SMURF2Q9HAU4 748 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SPON1Q9HCB6 807 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TM9SF3Q9HD45 589 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PRDM5Q9NQX1 630 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 DCAF13Q9NV06 445 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 C1orf109Q9NX04 203 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CCDC59Q9P031 241 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 KIAA1522Q9P206 1035 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 GIMAP2Q9UG22 337 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 KLHL3Q9UH77 587 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 RAPGEFL1Q9UHV5 662 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 GJD2Q9UKL4 321 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 INVSQ9Y283 1065 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC45A1Q9Y2W3 748 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TESMINQ9Y4I5 508 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TIMM22Q9Y584 194 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ANGPTL3Q9Y5C1 460 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 GMPPBQ9Y5P6 360 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PTGDR2Q9Y5Y4 395 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PEX16Q9Y5Y5 336 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 HS3ST4Q9Y661 456 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 DGKBQ9Y6T7 804 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 V9GYQ6 96 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SBF1O95248 1867 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SHROOM3Q8TF72 1996 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 IGLV3-10A0A075B6K4 115 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 A0A096LPI6 279 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 C17orf102A2RUQ5 167 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM172BPA6NC97 362 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 DRGXA6NNA5 263 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 EFCAB9A8MZ26 197 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CENPBD1B2RD01 187 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 C9JVG2 144 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM47E-STBD1D6RA91 191 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PLK4O00444 970 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 E2F3O00716 465 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PPP6CO00743 305 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 RGS13O14921 159 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 LSM1O15116 133 aaKnown RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 B4GAT1O43505 415 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 DYRK3O43781 588 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PEX10O60683 326 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 DPM1O60762 260 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PRAMEF11O60813 436 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM20BO75063 409 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CREG1O75629 220 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 RFPL2O75678 378 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 INMTO95050 263 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CCNDBP1O95273 360 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 KRT75O95678 551 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 OXSR1O95747 527 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SNAI1O95863 264 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 DLGAP3O95886 979 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MOCS2O96007 188 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MT-ND1P03886 318 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 KRT8P05787 483 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 HTR1AP08908 422 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 G6PDP11413 515 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PRPS2P11908 318 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCNAP12004 261 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC2A4P14672 509 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ACPPP15309 386 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TCF3P15923 654 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 EFNA1P20827 205 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 FPR1P21462 350 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 LPOP22079 712 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PTX3P26022 381 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PSMB9P28065 219 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms