RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 TRIM16O95361 564 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 IFNB1P01574 187 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 GBAP04062 536 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 HOXB5P09067 269 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 PCNAP12004 261 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 KRT5P13647 590 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 MMP9P14780 707 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 ITGAXP20702 1163 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 EEF1B2P24534 225 aaKnown RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 KRTAP5-9P26371 169 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 YBEYP58557 167 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 ASIC1P78348 528 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 GFPT1Q06210 699 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 FGFBP1Q14512 234 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 ZNF273Q14593 569 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 PDK1Q15118 436 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 RNPS1Q15287 305 aaKnown RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 COL28A1Q2UY09 1125 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 TWISTNBQ3B726 338 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 MDH1BQ5I0G3 518 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 SPOUT1Q5T280 376 aaKnown RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 FAM72AQ5TYM5 149 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 FAM72DQ6L9T8 149 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 C17orf99Q6UX52 265 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 KCTD9Q7L273 389 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 PRSS45Q7RTY3 260 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 ZER1Q7Z7L7 766 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 FAM72BQ86X60 149 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 KRTAP7-1Q8IUC3 87 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 C4orf19Q8IY42 314 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 HACE1Q8IYU2 909 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 RNF168Q8IYW5 571 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 ZCCHC9Q8N567 271 aaKnown RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 OR13A1Q8NGR1 328 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 KIAA1524Q8TCG1 905 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 SEPT1Q8WYJ6 367 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 RMDN2Q96LZ7 410 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 GDAP1L1Q96MZ0 367 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 CDRT15Q96T59 188 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 NYXQ9GZU5 481 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 DENND2DQ9H6A0 471 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 HAO2Q9NYQ3 351 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 C1RLQ9NZP8 487 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 CNOT8Q9UFF9 292 aaKnown RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 FBXW2Q9UKT8 454 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 PLAGL1Q9UM63 463 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 EXO1Q9UQ84 846 aaKnown RBP4.47□□□□□ -1.69
LINC01088-203ENST00000507476 LIPGQ9Y5X9 500 aa4.47□□□□□ -1.69
LINC01088-203ENST00000507476 ACEP12821 1306 aa4.46□□□□□ -1.69
LINC01088-203ENST00000507476 CLSPNQ9HAW4 1339 aa4.46□□□□□ -1.69
LINC01088-203ENST00000507476 A0A1B0GU03 582 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 CLRN2A0PK11 232 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 TYW5A2RUC4 315 aaKnown RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 SMIM30A4D0T7 59 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 CBY3A6NI87 242 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 H0YIN7 160 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 K7EPI3 171 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 SOCS6O14544 535 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 PAPSS1O43252 624 aaPredicted RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 RFPL2O75678 378 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 SNX4O95219 450 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 MOCS3O95396 460 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 TBX6O95947 436 aaPredicted RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 TFP02787 698 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 RLN1P04808 185 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 HIST1H2ABP04908 130 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 UROSP10746 265 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 HIST1H2ADP20671 130 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 CASP9P55211 416 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 KIAA1024LP59773 190 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 ST8SIA6P61647 398 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 SOWAHAQ2M3V2 549 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 SLC39A12Q504Y0 691 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 IFI44LQ53G44 452 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 ESCO2Q56NI9 601 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 DHRS7BQ6IAN0 325 aaPredicted RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 CASC4Q6P4E1 433 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 HIST3H2AQ7L7L0 130 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 TMEM110Q86TL2 294 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 SLC4A11Q8NBS3 891 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 SLC13A3Q8WWT9 602 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 ZNF501Q96CX3 271 aaPredicted RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 ZC3HAV1LQ96H79 300 aaKnown RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 CEP295NLQ96MC4 621 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 OR2A14Q96R47 310 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 PARK7Q99497 189 aaKnown RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 HNRNPABQ99729 332 aaKnown RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 RTN4RQ9BZR6 473 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 MMP27Q9H306 513 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 GOLPH3LQ9H4A5 285 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 AKIRIN1Q9H9L7 192 aaPredicted RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 EPB41L5Q9HCM4 733 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 BPIFA1Q9NP55 256 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 IARS2Q9NSE4 1012 aaKnown RBP4.46□□□□□ -1.7
LINC01088-203ENST00000507476 GDE1Q9NZC3 331 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 NINJ2Q9NZG7 142 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 IL17BQ9UHF5 180 aa4.46□□□□□ -1.7
LINC01088-203ENST00000507476 SMC3Q9UQE7 1217 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms