RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 C2orf76Q3KRA6 126 aa8.78□□□□□ -1
FN1-227ENST00000498719 SLC39A12Q504Y0 691 aa8.78□□□□□ -1
FN1-227ENST00000498719 AGKQ53H12 422 aa8.78□□□□□ -1
FN1-227ENST00000498719 PITRM1Q5JRX3 1037 aa8.78□□□□□ -1
FN1-227ENST00000498719 RARS2Q5T160 578 aaKnown RBP8.78□□□□□ -1
FN1-227ENST00000498719 CYP2R1Q6VVX0 501 aa8.78□□□□□ -1
FN1-227ENST00000498719 CYHR1Q6ZMK1 362 aa8.78□□□□□ -1
FN1-227ENST00000498719 SPATA31D4Q6ZUB0 917 aa8.78□□□□□ -1
FN1-227ENST00000498719 SETD3Q86TU7 594 aaPredicted RBP8.78□□□□□ -1
FN1-227ENST00000498719 C10orf53Q8N6V4 93 aa8.78□□□□□ -1
FN1-227ENST00000498719 ANKK1Q8NFD2 765 aa8.78□□□□□ -1
FN1-227ENST00000498719 HDAC10Q969S8 669 aa8.78□□□□□ -1
FN1-227ENST00000498719 PSMG2Q969U7 264 aa8.78□□□□□ -1
FN1-227ENST00000498719 KTI12Q96EK9 354 aaPredicted RBP8.78□□□□□ -1
FN1-227ENST00000498719 SH3GL3Q99963 347 aa8.78□□□□□ -1
FN1-227ENST00000498719 TMPRSS11EQ9UL52 423 aa8.78□□□□□ -1
FN1-227ENST00000498719 AURKCQ9UQB9 309 aa8.78□□□□□ -1
FN1-227ENST00000498719 PTGDR2Q9Y5Y4 395 aa8.78□□□□□ -1
FN1-227ENST00000498719 GREB1Q4ZG55 1949 aa8.78□□□□□ -1
FN1-227ENST00000498719 A0A1B0GTW7 788 aa8.78□□□□□ -1
FN1-227ENST00000498719 PRSS51A0A1B0GVH4 220 aa8.78□□□□□ -1
FN1-227ENST00000498719 PRORSD1PA6NEY8 169 aa8.78□□□□□ -1
FN1-227ENST00000498719 TRPC5OSA6NMA1 111 aa8.78□□□□□ -1
FN1-227ENST00000498719 C9JVG2 144 aa8.78□□□□□ -1
FN1-227ENST00000498719 M0QZQ0 153 aa8.78□□□□□ -1
FN1-227ENST00000498719 SLC22A2O15244 555 aa8.78□□□□□ -1
FN1-227ENST00000498719 MMP2P08253 660 aa8.78□□□□□ -1
FN1-227ENST00000498719 PIRTP0C851 137 aa8.78□□□□□ -1
FN1-227ENST00000498719 PIM1P11309 404 aaPredicted RBP8.78□□□□□ -1
FN1-227ENST00000498719 OR1G1P47890 313 aa8.78□□□□□ -1
FN1-227ENST00000498719 SERPINH1P50454 418 aaKnown RBP8.78□□□□□ -1
FN1-227ENST00000498719 MLLT6P55198 1093 aaPredicted RBP8.78□□□□□ -1
FN1-227ENST00000498719 NME5P56597 212 aa8.78□□□□□ -1
FN1-227ENST00000498719 PSME3P61289 254 aa8.78□□□□□ -1
FN1-227ENST00000498719 FASTKQ14296 549 aaKnown RBP8.78□□□□□ -1
FN1-227ENST00000498719 HERC3Q15034 1050 aa8.78□□□□□ -1
FN1-227ENST00000498719 INAQ16352 499 aa8.78□□□□□ -1
FN1-227ENST00000498719 NRF1Q16656 503 aa8.78□□□□□ -1
FN1-227ENST00000498719 HECTD2Q5U5R9 776 aa8.78□□□□□ -1
FN1-227ENST00000498719 AFMIDQ63HM1 303 aa8.78□□□□□ -1
FN1-227ENST00000498719 SLC25A24Q6NUK1 477 aa8.78□□□□□ -1
FN1-227ENST00000498719 BORAQ6PGQ7 559 aa8.78□□□□□ -1
FN1-227ENST00000498719 CCDC80Q76M96 950 aa8.78□□□□□ -1
FN1-227ENST00000498719 MRPL10Q7Z7H8 261 aaKnown RBP8.78□□□□□ -1
FN1-227ENST00000498719 TRIM74Q86UV6 250 aa8.78□□□□□ -1
FN1-227ENST00000498719 TRIM73Q86UV7 250 aa8.78□□□□□ -1
FN1-227ENST00000498719 TICAM1Q8IUC6 712 aa8.78□□□□□ -1
FN1-227ENST00000498719 CILP2Q8IUL8 1156 aa8.78□□□□□ -1
FN1-227ENST00000498719 MFN1Q8IWA4 741 aa8.78□□□□□ -1
FN1-227ENST00000498719 SLC7A5P1Q8MH63 180 aa8.78□□□□□ -1
FN1-227ENST00000498719 RYBPQ8N488 228 aaPredicted RBP8.78□□□□□ -1
FN1-227ENST00000498719 LZTR1Q8N653 840 aa8.78□□□□□ -1
FN1-227ENST00000498719 TTC9BQ8N6N2 239 aa8.78□□□□□ -1
FN1-227ENST00000498719 FAM110BQ8TC76 370 aa8.78□□□□□ -1
FN1-227ENST00000498719 METTL21AQ8WXB1 218 aa8.78□□□□□ -1
FN1-227ENST00000498719 NEIL1Q96FI4 390 aaPredicted RBP8.78□□□□□ -1
FN1-227ENST00000498719 SLC45A3Q96JT2 553 aa8.78□□□□□ -1
FN1-227ENST00000498719 C3orf30Q96M34 536 aa8.78□□□□□ -1
FN1-227ENST00000498719 ADAM2Q99965 735 aa8.78□□□□□ -1
FN1-227ENST00000498719 HERC2P3Q9BVR0 1158 aa8.78□□□□□ -1
FN1-227ENST00000498719 YIPF2Q9BWQ6 316 aa8.78□□□□□ -1
FN1-227ENST00000498719 MRPL1Q9BYD6 325 aaKnown RBP8.78□□□□□ -1
FN1-227ENST00000498719 MRM3Q9HC36 420 aaKnown RBP8.78□□□□□ -1
FN1-227ENST00000498719 CACNA2D2Q9NY47 1150 aa8.78□□□□□ -1
FN1-227ENST00000498719 CGGBP1Q9UFW8 167 aaPredicted RBP8.78□□□□□ -1
FN1-227ENST00000498719 HEATR9A2RTY3 570 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 UBDO15205 165 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 CA12O43570 354 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 SUPT7LO94864 414 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 LTA4HP09960 611 aaKnown RBP8.77□□□□□ -1.01
FN1-227ENST00000498719 CTGFP29279 349 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 GGT5P36269 586 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 ACAA2P42765 397 aaKnown RBP8.77□□□□□ -1.01
FN1-227ENST00000498719 LEPRP48357 1165 aaKnown RBP8.77□□□□□ -1.01
FN1-227ENST00000498719 DNAJB13P59910 316 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 CYP4F8P98187 520 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 MYBPC1Q00872 1141 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 MGAT3Q09327 533 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 PSMD5Q16401 504 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 FBXO48Q5FWF7 155 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 REP15Q6BDI9 236 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 TIGD7Q6NT04 549 aaPredicted RBP8.77□□□□□ -1.01
FN1-227ENST00000498719 CHSY3Q70JA7 882 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 SERINC5Q86VE9 423 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 CDH26Q8IXH8 852 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 PGBD5Q8N414 524 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 MARVELD2Q8N4S9 558 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 ZNF610Q8N9Z0 462 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 PTERQ96BW5 349 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 NMD3Q96D46 503 aaKnown RBP8.77□□□□□ -1.01
FN1-227ENST00000498719 VWCEQ96DN2 955 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 IMP4Q96G21 291 aaKnown RBP8.77□□□□□ -1.01
FN1-227ENST00000498719 ADAD1Q96M93 576 aaKnown RBP8.77□□□□□ -1.01
FN1-227ENST00000498719 PKP4Q99569 1192 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 SLC25A51Q9H1U9 297 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 GSTO2Q9H4Y5 243 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 SEMA3GQ9NS98 782 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 TBC1D13Q9NVG8 400 aa8.77□□□□□ -1.01
FN1-227ENST00000498719 PSMD12O00232 456 aaPredicted RBP8.76□□□□□ -1.01
FN1-227ENST00000498719 DENRO43583 198 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms