RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 MBOAT1Q6ZNC8 495 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 CLEC14AQ86T13 490 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 TBC1D21Q8IYX1 336 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 ARL14Q8N4G2 192 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 GPR156Q8NFN8 814 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 RHBDD1Q8TEB9 315 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 CNDP2Q96KP4 475 aaKnown RBP13.21□□□□□ -0.29
CPNE1-227ENST00000498056 KIR3DX1Q9H7L2 352 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 MVB12BQ9H7P6 319 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 SYNDIG1Q9H7V2 258 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 EVA1BQ9NVM1 165 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 ZNF358Q9NW07 568 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 SENP1Q9P0U3 644 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 XPR1Q9UBH6 696 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 NOVA2Q9UNW9 492 aaKnown RBP13.21□□□□□ -0.29
CPNE1-227ENST00000498056 RNF215Q9Y6U7 377 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 COLEC10Q9Y6Z7 277 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 COL27A1Q8IZC6 1860 aaPredicted RBP13.21□□□□□ -0.3
CPNE1-227ENST00000498056 ZFHX2Q9C0A1 2572 aaPredicted RBP13.21□□□□□ -0.3
CPNE1-227ENST00000498056 GVINP1Q7Z2Y8 2422 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 CPED1A4D0V7 1026 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 NCF1BA6NI72 391 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-227ENST00000498056 NCF1CA8MVU1 366 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-227ENST00000498056 TK2O00142 265 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 SH3BP5O60239 455 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 KDM1AO60341 852 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 C1orf105O95561 183 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 LDOC1O95751 146 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-227ENST00000498056 GUCA1CO95843 209 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 ENO2P09104 434 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-227ENST00000498056 COL6A2P12110 1019 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 NCF1P14598 390 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-227ENST00000498056 XRCC1P18887 633 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-227ENST00000498056 FASLGP48023 281 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 PHKG1Q16816 387 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 N4BP2L1Q5TBK1 243 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-227ENST00000498056 GUSBP11Q6P575 273 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 SBSNQ6UWP8 590 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 CYHR1Q6ZMK1 362 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 RAB42Q8N4Z0 105 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 FAM181AQ8N9Y4 354 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 OR52E1Q8NGJ3 308 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 MAGEC3Q8TD91 643 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 ASB11Q8WXH4 323 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 CCDC74AQ96AQ1 378 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 PDLIM5Q96HC4 596 aaKnown RBP13.2□□□□□ -0.3
CPNE1-227ENST00000498056 CAMK1GQ96NX5 476 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 SLC38A3Q99624 504 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 EGFL8Q99944 293 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 NCKIPSDQ9NZQ3 722 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 PADI4Q9UM07 663 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 WDR87Q6ZQQ6 2873 aa13.2□□□□□ -0.3
CPNE1-227ENST00000498056 LY6G6EA0A0G2JKS1 128 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 SLC16A5O15375 505 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 KERAO60938 352 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 GSTA1P08263 222 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 HIST1H2AGP0C0S8 130 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-227ENST00000498056 CREB1P16220 341 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 HIST1H2ADP20671 130 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 TSTA3Q13630 321 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-227ENST00000498056 ACAP2Q15057 778 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 PPP1R3AQ16821 1122 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 TTMPQ5BVD1 217 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-227ENST00000498056 AGBL2Q5U5Z8 902 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 C16orf46Q6P387 395 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 OGFOD3Q6PK18 319 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 TMEM26Q6ZUK4 368 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 EFL1Q7Z2Z2 1120 aaKnown RBP13.19□□□□□ -0.3
CPNE1-227ENST00000498056 TAX1BP1Q86VP1 789 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 LCA5Q86VQ0 697 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 C17orf82Q86X59 251 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-227ENST00000498056 RBM12BQ8IXT5 1001 aaKnown RBP13.19□□□□□ -0.3
CPNE1-227ENST00000498056 CCDC63Q8NA47 563 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 MCOLN3Q8TDD5 553 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 LCN9Q8WX39 176 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 NAT6Q93015 286 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 KIAA1191Q96A73 305 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 RAD51AP1Q96B01 352 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 ARL8AQ96BM9 186 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 HIST1H2AHQ96KK5 128 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 IL17FQ96PD4 163 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 HIST1H2AJQ99878 128 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 SELENOSQ9BQE4 189 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 H2AFJQ9BTM1 129 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 TBC1D10AQ9BXI6 508 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 TRIM54Q9BYV2 358 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 MRPL46Q9H2W6 279 aaKnown RBP13.19□□□□□ -0.3
CPNE1-227ENST00000498056 TFB2MQ9H5Q4 396 aaKnown RBP13.19□□□□□ -0.3
CPNE1-227ENST00000498056 XKR8Q9H6D3 395 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 PARVBQ9HBI1 364 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 SLC40A1Q9NP59 571 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 MKS1Q9NXB0 559 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 ARL15Q9NXU5 204 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 CPSF2Q9P2I0 782 aaKnown RBP13.19□□□□□ -0.3
CPNE1-227ENST00000498056 LRIT1Q9P2V4 623 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 POLG2Q9UHN1 485 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 ICKQ9UPZ9 632 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 PDE10AQ9Y233 779 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms