RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TEPSINQ96N21 525 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 QRFPRQ96P65 431 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 OR14A2Q96R54 314 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 MMS19Q96T76 1030 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 PIGQQ9BRB3 760 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 NACAP1Q9BZK3 213 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 UBQLN3Q9H347 655 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 TBC1D17Q9HA65 648 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 MYNNQ9NPC7 610 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 DUSP22Q9NRW4 184 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 TFCP2L1Q9NZI6 479 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 FLRT1Q9NZU1 646 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 OR14J1Q9UGF5 321 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 CDC14AQ9UNH5 594 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 PLA2G4CQ9UP65 541 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 HBS1LQ9Y450 684 aaKnown RBP5.91□□□□□ -1.46
BRCA1-224ENST00000497488 MAB21L2Q9Y586 359 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 VWDEQ8N2E2 1590 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 CEP170BQ9Y4F5 1589 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-224ENST00000497488 CAMSAP1Q5T5Y3 1602 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 A0A096LPK6 155 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 MACROD2A1Z1Q3 448 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 WDR27A2RRH5 827 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 MROH6A6NGR9 719 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ANKDD1BA6NHY2 528 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 AHRRA9YTQ3 701 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 H0YIG0 161 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 H0YIV9 168 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 HS3ST1O14792 307 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 CHADO15335 359 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 RNMTO43148 476 aaKnown RBP5.9□□□□□ -1.46
BRCA1-224ENST00000497488 NDUFS4O43181 175 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 TSPAN1O60635 241 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 LPXNO60711 386 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 SEMA7AO75326 666 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 CYP2F1P24903 491 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 RFC4P35249 363 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 IER3P46695 156 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 SLC6A12P48065 614 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 NPBWR1P48145 328 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 CNN1P51911 297 aaKnown RBP5.9□□□□□ -1.46
BRCA1-224ENST00000497488 MFAP3P55082 362 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 FOXL1Q12952 345 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 GALNT3Q14435 633 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 MELKQ14680 651 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 NR1D2Q14995 579 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ZMYND11Q15326 602 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 STXBP2Q15833 593 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 KCNMB1Q16558 191 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 CCDC152Q4G0S7 254 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 PLEKHO1Q53GL0 409 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-224ENST00000497488 HSP90B2PQ58FF3 399 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ARTNQ5T4W7 220 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 XP32Q5T750 250 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 PRR27Q6MZM9 219 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 VWA1Q6PCB0 445 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 NRARPQ7Z6K4 114 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 TMC8Q8IU68 726 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF611Q8N823 705 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 MCPH1Q8NEM0 835 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 STEAP2Q8NFT2 490 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 OR1J2Q8NGS2 313 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF671Q8TAW3 534 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 TBC1D16Q8TBP0 767 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 HM13Q8TCT9 377 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 FUBP1Q96AE4 644 aaKnown RBP5.9□□□□□ -1.46
BRCA1-224ENST00000497488 PGBD1Q96JS3 809 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ZBTB18Q99592 522 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF559Q9BR84 538 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ATG101Q9BSB4 218 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 FSD1LQ9BXM9 530 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 EGLN1Q9GZT9 426 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ATG10Q9H0Y0 220 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 NAPBQ9H115 298 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 CDT1Q9H211 546 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ACTR5Q9H9F9 607 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF304Q9HCX3 659 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 DPP3Q9NY33 737 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 DLL3Q9NYJ7 618 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 PTGFRNQ9P2B2 879 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 RCOR1Q9UKL0 485 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 FOXA2Q9Y261 457 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-224ENST00000497488 MRPS7Q9Y2R9 242 aaKnown RBP5.9□□□□□ -1.46
BRCA1-224ENST00000497488 MFHAS1Q9Y4C4 1052 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 TMEM184BQ9Y519 407 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-224ENST00000497488 SPACA6W5XKT8 324 aa5.9□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF142P52746 1687 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-224ENST00000497488 ZC3H13Q5T200 1668 aaKnown RBP5.9□□□□□ -1.47
BRCA1-224ENST00000497488 TTC41PQ6P2S7 1318 aa5.9□□□□□ -1.47
BRCA1-224ENST00000497488 STRCQ7RTU9 1775 aa5.9□□□□□ -1.47
BRCA1-224ENST00000497488 ANKRD50Q9ULJ7 1429 aa5.9□□□□□ -1.47
BRCA1-224ENST00000497488 ERVK-7P63135 1459 aa5.9□□□□□ -1.47
BRCA1-224ENST00000497488 SPATA31D1Q6ZQQ2 1576 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 C15orf38-AP3S2A0A0A6YYH1 394 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 FAM149AA5PLN7 773 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM221A6NGB7 291 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 HEPACAM2A8MVW5 462 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 M0QX08 132 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 FLRT2O43155 660 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 PLPP2O43688 288 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms