RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 FBXO6Q9NRD1 293 aaPredicted RBP11.14□□□□□ -0.63
HLA-B-254ENST00000497377 IARS2Q9NSE4 1012 aaKnown RBP11.14□□□□□ -0.63
HLA-B-254ENST00000497377 GRHL1Q9NZI5 618 aa11.14□□□□□ -0.63
HLA-B-254ENST00000497377 CORO1CQ9ULV4 474 aaPredicted RBP11.14□□□□□ -0.63
HLA-B-254ENST00000497377 PCDHGA3Q9Y5H0 932 aa11.14□□□□□ -0.63
HLA-B-254ENST00000497377 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
HLA-B-254ENST00000497377 WDFY3Q8IZQ1 3526 aa11.14□□□□□ -0.63
HLA-B-254ENST00000497377 URB1O60287 2271 aaKnown RBP11.14□□□□□ -0.63
HLA-B-254ENST00000497377 PMS2P1A4D2B8 440 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 CTAGE15A4D2H0 777 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 SRRM3A6NNA2 597 aaPredicted RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 EFCAB7A8K855 629 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 TLX3O43711 291 aaPredicted RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 NIPSNAP2O75323 286 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 CTAGE8P0CG41 777 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 ERVK-10P10266 1014 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 FGF3P11487 239 aaPredicted RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 CCL4P13236 92 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 HGFP14210 728 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 ITIH1P19827 911 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 SLC5A2P31639 672 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 CCNFP41002 786 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 EIF2S3P41091 472 aaKnown RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 ETV5P41161 510 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 MAPK10P53779 464 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 CSE1LP55060 971 aaKnown RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 MC2RQ01718 297 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 PRKG2Q13237 762 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 GLE1Q53GS7 698 aaKnown RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 DNTTIP2Q5QJE6 756 aaKnown RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 TEDDM1Q5T9Z0 273 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 CACHD1Q5VU97 1274 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 UGT3A1Q6NUS8 523 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 NAPRTQ6XQN6 538 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 LRRC69Q6ZNQ3 347 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 CTAGE6Q86UF2 777 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 FAM129CQ86XR2 697 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 VRK3Q8IV63 474 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 DCUN1D3Q8IWE4 304 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 CTAGE4Q8IX94 777 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 MMGT1Q8N4V1 131 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 ZBTB2Q8N680 514 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 BMPERQ8N8U9 685 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 FBXO36Q8NEA4 188 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 OR4E2Q8NGC2 313 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 OR5AR1Q8NGP9 310 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 MAGEC3Q8TD91 643 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 PYROXD1Q8WU10 500 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 JPH3Q8WXH2 748 aaPredicted RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 ART4Q93070 314 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 PWWP2AQ96N64 755 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 RAB11FIP5Q9BXF6 653 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 DPH1Q9BZG8 443 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 PPANQ9NQ55 473 aaKnown RBP11.13□□□□□ -0.63
HLA-B-254ENST00000497377 NSMCE4AQ9NXX6 385 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 SLC39A1Q9NY26 324 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 OR6C2Q9NZP2 312 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 KLHL3Q9UH77 587 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 POMT2Q9UKY4 750 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 RAXQ9Y2V3 346 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 PCDHB11Q9Y5F2 797 aa11.13□□□□□ -0.63
HLA-B-254ENST00000497377 ZZEF1O43149 2961 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 C2orf74A8MZ97 194 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 EIF3FO00303 357 aaPredicted RBP11.12□□□□□ -0.63
HLA-B-254ENST00000497377 VPS26AO75436 327 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 HAUS5O94927 633 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 GSTA2P09210 222 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 CBSLP0DN79 551 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 ENO3P13929 434 aaPredicted RBP11.12□□□□□ -0.63
HLA-B-254ENST00000497377 NELFEP18615 380 aaKnown RBP11.12□□□□□ -0.63
HLA-B-254ENST00000497377 POLR2CP19387 275 aaPredicted RBP11.12□□□□□ -0.63
HLA-B-254ENST00000497377 CD9P21926 228 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 CBSP35520 551 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 SKIV2L2P42285 1042 aaKnown RBP11.12□□□□□ -0.63
HLA-B-254ENST00000497377 CLCN7P51798 805 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 PLTPP55058 493 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 MGAT5Q09328 741 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 ABRQ12979 859 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 ZNF789Q5FWF6 425 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 HP1BP3Q5SSJ5 553 aaPredicted RBP11.12□□□□□ -0.63
HLA-B-254ENST00000497377 DCAF12Q5T6F0 453 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 LRRC8EQ6NSJ5 796 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 ZNF549Q6P9A3 640 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 CNSTQ6PJW8 725 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 CEACAM20Q6UY09 585 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 FAM92BQ6ZTR7 304 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 CEP128Q6ZU80 1094 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 NEK10Q6ZWH5 1172 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 ANKMY2Q8IV38 441 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 ZBED8Q8IZ13 594 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 UNC5BQ8IZJ1 945 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 RAB42Q8N4Z0 105 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 CEP112Q8N8E3 955 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 SKA2Q8WVK7 121 aaPredicted RBP11.12□□□□□ -0.63
HLA-B-254ENST00000497377 SEC14L1Q92503 715 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 USP7Q93009 1102 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 SLC41A2Q96JW4 573 aa11.12□□□□□ -0.63
HLA-B-254ENST00000497377 WDR83Q9BRX9 315 aaKnown RBP11.12□□□□□ -0.63
HLA-B-254ENST00000497377 AARSD1Q9BTE6 412 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms