RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 OR5AR1Q8NGP9 310 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 AENQ8WTP8 325 aaKnown RBP11.58□□□□□ -0.56
APTX-233ENST00000496030 ZFPM2Q8WW38 1151 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 CDKL2Q92772 493 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 FGF11Q92914 225 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 SH3KBP1Q96B97 665 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 CXorf40BQ96DE9 158 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 ATXN7L3BQ96GX2 97 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 VPS39Q96JC1 886 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 CYTH2Q99418 400 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 RBBP8Q99708 897 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 TBC1D10AQ9BXI6 508 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 PARD6BQ9BYG5 372 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 NRSN2Q9GZP1 204 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 TWSG1Q9GZX9 223 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 CCDC68Q9H2F9 335 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 LRRN3Q9H3W5 708 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 CPNE5Q9HCH3 593 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 SLC24A2Q9UI40 661 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 NFS1Q9Y697 457 aa11.58□□□□□ -0.56
APTX-233ENST00000496030 KIF26BQ2KJY2 2108 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 FAM95CA0A1B0GW59 222 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 E5RI56 91 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 SLC28A2O43868 658 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 VPS26AO75436 327 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 RPLP0P05388 317 aaKnown RBP11.57□□□□□ -0.56
APTX-233ENST00000496030 CDK4P11802 303 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 MCM3P25205 808 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 GCAP28676 217 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 PHBP35232 272 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 SKIV2L2P42285 1042 aaKnown RBP11.57□□□□□ -0.56
APTX-233ENST00000496030 CSRP3P50461 194 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 LIMK2P53671 638 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 EPHA4P54764 986 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 NAB1Q13506 487 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 SLC29A2Q14542 456 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 TMED2Q15363 201 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 UAP1Q16222 522 aaPredicted RBP11.57□□□□□ -0.56
APTX-233ENST00000496030 GRTP1Q5TC63 336 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 HES3Q5TGS1 186 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 NKAIN2Q5VXU1 208 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 FAM45BPQ6NSW5 357 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 ZNF574Q6ZN55 896 aaPredicted RBP11.57□□□□□ -0.56
APTX-233ENST00000496030 NEK10Q6ZWH5 1172 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 USP53Q70EK8 1073 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 TRIM48Q8IWZ4 208 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 RBM12BQ8IXT5 1001 aaKnown RBP11.57□□□□□ -0.56
APTX-233ENST00000496030 CPNE9Q8IYJ1 553 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 GPATCH11Q8N954 259 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 UHMK1Q8TAS1 419 aaKnown RBP11.57□□□□□ -0.56
APTX-233ENST00000496030 FAM45AQ8TCE6 357 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 EEF1AKMT1Q8WVE0 214 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 JPH3Q8WXH2 748 aaPredicted RBP11.57□□□□□ -0.56
APTX-233ENST00000496030 WBP1Q96G27 269 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 NAF1Q96HR8 494 aaKnown RBP11.57□□□□□ -0.56
APTX-233ENST00000496030 FERD3LQ96RJ6 166 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 SLC38A3Q99624 504 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 GPR22Q99680 433 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 KIR3DX1Q9H7L2 352 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 MVB12BQ9H7P6 319 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 TAS2R13Q9NYV9 303 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 RAB21Q9UL25 225 aa11.57□□□□□ -0.56
APTX-233ENST00000496030 RUVBL2Q9Y230 463 aaKnown RBP11.57□□□□□ -0.56
APTX-233ENST00000496030 A0A087WUV0 522 aaPredicted RBP11.56□□□□□ -0.56
APTX-233ENST00000496030 GFYI3L273 518 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 IFRD1O00458 451 aaPredicted RBP11.56□□□□□ -0.56
APTX-233ENST00000496030 NDUFS1P28331 727 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 CSF2RBP32927 897 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 PDX1P52945 283 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 PRKG2Q13237 762 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 ZNF460Q14592 562 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 KLHL38Q2WGJ6 581 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 CCSMST1Q4G0I0 132 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 ARHGAP40Q5TG30 622 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 UNC5DQ6UXZ4 953 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 TBC1D21Q8IYX1 336 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 CACTIN-AS1Q8N1I8 211 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 OR5K2Q8NHB8 316 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 DCAKDQ8WVC6 231 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 SLC44A1Q8WWI5 657 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 ASB11Q8WXH4 323 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 TTC9Q92623 222 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 DLG3Q92796 817 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 ELMO2Q96JJ3 720 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 NUDT22Q9BRQ3 303 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 DHRS4Q9BTZ2 278 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 MENTQ9BUN1 341 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.56□□□□□ -0.56
APTX-233ENST00000496030 TFB2MQ9H5Q4 396 aaKnown RBP11.56□□□□□ -0.56
APTX-233ENST00000496030 CAB39LQ9H9S4 337 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 RDH14Q9HBH5 336 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 KCNK4Q9NYG8 393 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 PDP2Q9P2J9 529 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 TRMT6Q9UJA5 497 aaKnown RBP11.56□□□□□ -0.56
APTX-233ENST00000496030 IKZF3Q9UKT9 509 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 ATXN7L1Q9ULK2 861 aaPredicted RBP11.56□□□□□ -0.56
APTX-233ENST00000496030 ASF1AQ9Y294 204 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 HEBP2Q9Y5Z4 205 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 COLEC10Q9Y6Z7 277 aa11.56□□□□□ -0.56
APTX-233ENST00000496030 ANKRD12Q6UB98 2062 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms