RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	IYD	Q6PHW0	289 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	XKR5	Q6UX68	686 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	CDHR3	Q6ZTQ4	885 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	SFRP1	Q8N474	314 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	FBXO39	Q8N4B4	442 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	SPATA6L	Q8N4H0	392 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	ARL10	Q8N8L6	244 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	ANKRD42	Q8N9B4	389 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	OR6C4	Q8NGE1	309 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	CFAP61	Q8NHU2	1237 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	CCL4L1	Q8NHW4	92 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	RAB3IL1	Q8TBN0	382 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	DYDC1	Q8WWB3	177 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	PTER	Q96BW5	349 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	FERD3L	Q96RJ6	166 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	EGFL8	Q99944	293 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.2	□□□□□ -0.3
APTX-231	ENST00000494973	KIR3DX1	Q9H7L2	352 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	UCK1	Q9HA47	277 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	PRDM8	Q9NQV8	689 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	INTS9	Q9NV88	658 aa	Known RBP	13.2	□□□□□ -0.3
APTX-231	ENST00000494973	CD274	Q9NZQ7	290 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	COPG2	Q9UBF2	871 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	TSR3	Q9UJK0	312 aa	Known RBP	13.2	□□□□□ -0.3
APTX-231	ENST00000494973	STK38L	Q9Y2H1	464 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	PLEKHM1	Q9Y4G2	1056 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973		B4DGG1	531 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	YY2	O15391	372 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	NEFH	P12036	1026 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	CREB1	P16220	341 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	SHMT2	P34897	504 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	ETV4	P43268	484 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	FASLG	P48023	281 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	SLC14A1	Q13336	389 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	OR4D1	Q15615	310 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	TUBB8	Q3ZCM7	444 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.19	□□□□□ -0.3
APTX-231	ENST00000494973	OGFOD3	Q6PK18	319 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	KIRREL3	Q8IZU9	778 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	ARMC2	Q8NEN0	867 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	OR9A1P	Q8NGU1	263 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	ZBTB9	Q96C00	473 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	FBXL8	Q96CD0	374 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	INSM2	Q96T92	566 aa	Predicted RBP	13.19	□□□□□ -0.3
APTX-231	ENST00000494973	GTPBP2	Q9BX10	602 aa	Known RBP	13.19	□□□□□ -0.3
APTX-231	ENST00000494973	ZNF358	Q9NW07	568 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	WWOX	Q9NZC7	414 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	CPSF2	Q9P2I0	782 aa	Known RBP	13.19	□□□□□ -0.3
APTX-231	ENST00000494973	CPNE7	Q9UBL6	633 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	EMCN	Q9ULC0	261 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	PDE10A	Q9Y233	779 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	WDR37	Q9Y2I8	494 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	KNL1	Q8NG31	2342 aa		13.19	□□□□□ -0.3
APTX-231	ENST00000494973	PATE3	B3GLJ2	98 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	TARM1	B6A8C7	271 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	KLK8	O60259	260 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	SDC3	O75056	442 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	TOP3B	O95985	862 aa	Known RBP	13.18	□□□□□ -0.3
APTX-231	ENST00000494973	DHRS4L1	P0CG22	281 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	SERPINB5	P36952	375 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	BDKRB1	P46663	353 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	SERPINB4	P48594	390 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	RAB28	P51157	221 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	DNAJB13	P59910	316 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	UBE2I	P63279	158 aa	Known RBP	13.18	□□□□□ -0.3
APTX-231	ENST00000494973	CLCA4	Q14CN2	919 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	SETDB1	Q15047	1291 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	CSRP2	Q16527	193 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	C14orf28	Q4W4Y0	310 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	LIPM	Q5VYY2	423 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	ANKS6	Q68DC2	871 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	C16orf46	Q6P387	395 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	KLHL35	Q6PF15	583 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	LRRC70	Q7Z2Q7	622 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	MINDY1	Q8N5J2	469 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.18	□□□□□ -0.3
APTX-231	ENST00000494973	OR4C6	Q8NH72	309 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	PPP1R14C	Q8TAE6	165 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	SAP25	Q8TEE9	199 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	DENND1A	Q8TEH3	1009 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	UBTD2	Q8WUN7	234 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	EXT2	Q93063	718 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	PCBD2	Q9H0N5	130 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	EPB41L1	Q9H4G0	881 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	DNAAF2	Q9NVR5	837 aa	Known RBP	13.18	□□□□□ -0.3
APTX-231	ENST00000494973	SLC17A7	Q9P2U7	560 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	ADAMTS6	Q9UKP5	1117 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	ST14	Q9Y5Y6	855 aa		13.18	□□□□□ -0.3
APTX-231	ENST00000494973	TDRD6	O60522	2096 aa	Known RBP	13.17	□□□□□ -0.3
APTX-231	ENST00000494973	TMEM131	Q92545	1883 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	OR52A4P	A6NMU1	304 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	PROB1	E7EW31	1015 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	UBXN8	O00124	270 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	MATN2	O00339	956 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	FLRT2	O43155	660 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	TRIM13	O60858	407 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	BPGM	P07738	259 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	CELA2B	P08218	269 aa	Predicted RBP	13.17	□□□□□ -0.3
APTX-231	ENST00000494973	CHN1	P15882	459 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	GRK2	P25098	689 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms