RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 BTN3A3O00478 584 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 MAP3K7O43318 606 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 NELFEP18615 380 aaKnown RBP15.46■□□□□ 0.07
LIME1-209ENST00000494776 KPNA2P52292 529 aaKnown RBP15.46■□□□□ 0.07
LIME1-209ENST00000494776 PLTPP55058 493 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 SH3BP2P78314 561 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 CAV1Q03135 178 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 TUBB2AQ13885 445 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 CYB5D1Q6P9G0 228 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 KMT5CQ86Y97 462 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 DCUN1D3Q8IWE4 304 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 BMPERQ8N8U9 685 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 KIF18AQ8NI77 898 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 PYROXD1Q8WU10 500 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 PMEPA1Q969W9 287 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 OR6C1Q96RD1 312 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 NRTNQ99748 197 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 ZPBPQ9BS86 351 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 TUBB2BQ9BVA1 445 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 APMAPQ9HDC9 416 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 SOHLH2Q9NX45 425 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 GALPQ9UBC7 116 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 SLC39A10Q9ULF5 831 aa15.46■□□□□ 0.07
LIME1-209ENST00000494776 PKD1L2Q7Z442 2459 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 STMND1H3BQB6 276 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 TP73O15350 636 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 VPS26AO75436 327 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 ZBTB11O95625 1053 aaPredicted RBP15.45■□□□□ 0.06
LIME1-209ENST00000494776 LIPCP11150 499 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 PRDX3P30048 256 aaKnown RBP15.45■□□□□ 0.06
LIME1-209ENST00000494776 HSD11B2P80365 405 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 SLC7A5Q01650 507 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 FASTKD3Q14CZ7 662 aaKnown RBP15.45■□□□□ 0.06
LIME1-209ENST00000494776 COL28A1Q2UY09 1125 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 TMTC4Q5T4D3 741 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 STEAP4Q687X5 459 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 UGT3A1Q6NUS8 523 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 FBXO38Q6PIJ6 1188 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 KIAA0408Q6ZU52 694 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 RASGRP3Q8IV61 690 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 PALM2Q8IXS6 379 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 ADGRF3Q8IZF5 1079 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 CARFQ8N187 725 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 RAB42Q8N4Z0 105 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 MAGEC3Q8TD91 643 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 KCNJ9Q92806 393 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 ELMO2Q96JJ3 720 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 PDE7BQ9NP56 450 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 SAYSD1Q9NPB0 183 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 LATS2Q9NRM7 1088 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 C1GALT1Q9NS00 363 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 SIDT1Q9NXL6 827 aaKnown RBP15.45■□□□□ 0.06
LIME1-209ENST00000494776 ACTR10Q9NZ32 417 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 OR6C2Q9NZP2 312 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 CIDEBQ9UHD4 219 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 ACSL6Q9UKU0 697 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 POMT2Q9UKY4 750 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 LHX6Q9UPM6 363 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 RUVBL2Q9Y230 463 aaKnown RBP15.45■□□□□ 0.06
LIME1-209ENST00000494776 NFS1Q9Y697 457 aa15.45■□□□□ 0.06
LIME1-209ENST00000494776 APC2O95996 2303 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 URB1O60287 2271 aaKnown RBP15.44■□□□□ 0.06
LIME1-209ENST00000494776 ISM1B1AKI9 464 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 E7ESA3 106 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 CHRM5P08912 532 aaPredicted RBP15.44■□□□□ 0.06
LIME1-209ENST00000494776 ATP5DP30049 168 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 CCNFP41002 786 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 ATP1A2P50993 1020 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 RAB28P51157 221 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 CLCN7P51798 805 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 ACY1Q03154 408 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 TLE3Q04726 772 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 CLN3Q13286 438 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 IL11RAQ14626 422 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 KCNAB1Q14722 419 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 KYNUQ16719 465 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 KLHL38Q2WGJ6 581 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 ACSBG2Q5FVE4 666 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 TEDDM1Q5T9Z0 273 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 ZNF549Q6P9A3 640 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 TRMT10BQ6PF06 316 aaKnown RBP15.44■□□□□ 0.06
LIME1-209ENST00000494776 CAPN12Q6ZSI9 719 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 CCDC25Q86WR0 208 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 CNTN4Q8IWV2 1026 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 INPP5DQ92835 1189 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 RAD51AP1Q96B01 352 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 SLC41A2Q96JW4 573 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 PPM1MQ96MI6 270 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 NDNQ99608 321 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 GPR21Q99679 349 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 WDR83Q9BRX9 315 aaKnown RBP15.44■□□□□ 0.06
LIME1-209ENST00000494776 AARSD1Q9BTE6 412 aaKnown RBP15.44■□□□□ 0.06
LIME1-209ENST00000494776 LRRC1Q9BTT6 524 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 RAB11FIP5Q9BXF6 653 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 GRHL1Q9NZI5 618 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 ZFATQ9P243 1243 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 SEMA5BQ9P283 1151 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 TRMT6Q9UJA5 497 aaKnown RBP15.44■□□□□ 0.06
LIME1-209ENST00000494776 DHRS7Q9Y394 339 aa15.44■□□□□ 0.06
LIME1-209ENST00000494776 DMXL2Q8TDJ6 3036 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms