RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 SHMT2P34897 504 aa23.08■■□□□ 1.29
TTC3-224ENST00000494243 CCDC38Q502W7 563 aa23.08■■□□□ 1.29
TTC3-224ENST00000494243 KIAA1328Q86T90 577 aa23.08■■□□□ 1.29
TTC3-224ENST00000494243 TBC1D21Q8IYX1 336 aa23.08■■□□□ 1.29
TTC3-224ENST00000494243 TMEM102Q8N9M5 508 aaPredicted RBP23.08■■□□□ 1.29
TTC3-224ENST00000494243 GLIS1Q8NBF1 620 aa23.08■■□□□ 1.29
TTC3-224ENST00000494243 OR52K1Q8NGK4 314 aa23.08■■□□□ 1.29
TTC3-224ENST00000494243 ELMO1Q92556 727 aa23.08■■□□□ 1.29
TTC3-224ENST00000494243 TCTN2Q96GX1 697 aa23.08■■□□□ 1.29
TTC3-224ENST00000494243 SLC7A5P2Q9GIP4 190 aa23.08■■□□□ 1.29
TTC3-224ENST00000494243 SPRTNQ9H040 489 aaPredicted RBP23.08■■□□□ 1.29
TTC3-224ENST00000494243 USP9YO00507 2555 aaPredicted RBP23.07■■□□□ 1.28
TTC3-224ENST00000494243 QSOX1O00391 747 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 ZNF185O15231 689 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 VPS4BO75351 444 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 FTH1P02794 183 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 CTSBP07858 339 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 CHRM5P08912 532 aaPredicted RBP23.07■■□□□ 1.28
TTC3-224ENST00000494243 HBQ1P09105 142 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 GNLYP22749 145 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 ATP1A4Q13733 1029 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 MED25Q71SY5 747 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 LINC00523Q86TU6 105 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 TMEM139Q8IV31 216 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 GPR135Q8IZ08 494 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 EFCAB3Q8N7B9 438 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 OR13J1Q8NGT2 312 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.07■■□□□ 1.287e-6■■■■■ 27.5
TTC3-224ENST00000494243 ALS2CR12Q96Q35 445 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 CHRNA10Q9GZZ6 450 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 RBSNQ9H1K0 784 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 POLG2Q9UHN1 485 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 VPS4AQ9UN37 437 aa23.07■■□□□ 1.28
TTC3-224ENST00000494243 BLACEA4D250 179 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 A6NL46 340 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 OR1I1O60431 355 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 OR2B3O76000 313 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 CBSLP0DN79 551 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 AGXTP21549 392 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 CBSP35520 551 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 DEFB110Q30KQ9 67 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 JMJD6Q6NYC1 403 aaPredicted RBP23.06■■□□□ 1.28
TTC3-224ENST00000494243 SYCE1Q8N0S2 351 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 Q8NA96 180 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 OR5K2Q8NHB8 316 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 HES6Q96HZ4 224 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 DHRS4Q9BTZ2 278 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 OR6C2Q9NZP2 312 aa23.06■■□□□ 1.28
TTC3-224ENST00000494243 TDRKHQ9Y2W6 561 aaKnown RBP23.06■■□□□ 1.28
TTC3-224ENST00000494243 FER1L5A0AVI2 2057 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 C9J4A7 227 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 RHBDD2Q6NTF9 364 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 HOOK3Q86VS8 718 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 RBMXL3Q8N7X1 1067 aaKnown RBP23.05■■□□□ 1.28
TTC3-224ENST00000494243 ATG4AQ8WYN0 398 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 HDAC10Q969S8 669 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 GBP5Q96PP8 586 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 BAG1Q99933 345 aaPredicted RBP23.05■■□□□ 1.28
TTC3-224ENST00000494243 SLC2A6Q9UGQ3 507 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 PLAGL1Q9UM63 463 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 AP1M2Q9Y6Q5 423 aa23.05■■□□□ 1.28
TTC3-224ENST00000494243 A0A0J9YY10 115 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 DPM1O60762 260 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 OR56A5P0C7T3 313 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 PEBP1P30086 187 aaKnown RBP23.04■■□□□ 1.28
TTC3-224ENST00000494243 GRIA1P42261 906 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 RRADP55042 308 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 PLOD1Q02809 727 aaPredicted RBP23.04■■□□□ 1.28
TTC3-224ENST00000494243 KIF5AQ12840 1032 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 CDH17Q12864 832 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 C1orf189Q5VU69 101 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 DNAJC22Q8N4W6 341 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 N4BP2L2Q92802 583 aaPredicted RBP23.04■■□□□ 1.28
TTC3-224ENST00000494243 ZNF778Q96MU6 729 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 SMAD5Q99717 465 aaKnown RBP23.04■■□□□ 1.28
TTC3-224ENST00000494243 MFRPQ9BY79 579 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 ETNK1Q9HBU6 452 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 GPR83Q9NYM4 423 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 IMPACTQ9P2X3 320 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 PADI2Q9Y2J8 665 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 SHANK1Q9Y566 2161 aa23.04■■□□□ 1.28
TTC3-224ENST00000494243 ERI2A8K979 691 aaKnown RBP23.03■■□□□ 1.28
TTC3-224ENST00000494243 SUN1O94901 812 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 GOT2P00505 430 aaKnown RBP23.03■■□□□ 1.28
TTC3-224ENST00000494243 STIP1P31948 543 aaKnown RBP23.03■■□□□ 1.28
TTC3-224ENST00000494243 OTX2P32243 289 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 ACVR1Q04771 509 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 SSPNQ14714 243 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 OASLQ15646 514 aaKnown RBP23.03■■□□□ 1.28
TTC3-224ENST00000494243 INPP5JQ15735 1006 aaPredicted RBP23.03■■□□□ 1.28
TTC3-224ENST00000494243 PRR30Q53SZ7 412 aaPredicted RBP23.03■■□□□ 1.28
TTC3-224ENST00000494243 TSTD2Q5T7W7 516 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 MLIPQ5VWP3 458 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 LYPLAL1Q5VWZ2 237 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 MRGPREQ86SM8 312 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 RAB43Q86YS6 212 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 HPS6Q86YV9 775 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 DNAAF3Q8N9W5 541 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 DESI2Q9BSY9 194 aa23.03■■□□□ 1.28
TTC3-224ENST00000494243 LUZP4Q9P127 313 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms