RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SLC30A4O14863 429 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 TFECO14948 347 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-207ENST00000494090 AREL1O15033 823 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 AP2A2O94973 939 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 RPL26P61254 145 aaKnown RBP18.81■□□□□ 0.6
COL27A1-207ENST00000494090 ING5Q8WYH8 240 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 FAM210AQ96ND0 272 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 CDH7Q9ULB5 785 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 HOXD13P35453 343 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 STARP49675 285 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 MTPNP58546 118 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 C5orf22Q49AR2 442 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 TMEM198Q66K66 360 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 RAB43Q86YS6 212 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 ESAMQ96AP7 390 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 TMEM209Q96SK2 561 aa18.81■□□□□ 0.6
COL27A1-207ENST00000494090 A0A1W2PQ72 361 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.8■□□□□ 0.6
COL27A1-207ENST00000494090 K7EPI3 171 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 GNSP15586 552 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 ATP5A1P25705 553 aaKnown RBP18.8■□□□□ 0.6
COL27A1-207ENST00000494090 NRLP54845 237 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 OGDHQ02218 1023 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 CNPY1Q3B7I2 92 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 AMZ2Q86W34 360 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 PACRGLQ8N7B6 248 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 TOP1MTQ969P6 601 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 PCDHAC1Q9H158 963 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 ITM2CQ9NQX7 267 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 TRNAU1APQ9NX07 287 aaKnown RBP18.8■□□□□ 0.6
COL27A1-207ENST00000494090 FBXW2Q9UKT8 454 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 TRBV23OR9-2A0A075B6M9 112 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 H0YGN5 161 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 PDX1P52945 283 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 ECT2LQ008S8 904 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 MERTKQ12866 999 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 TIFABQ6ZNK6 161 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 TSEN15Q8WW01 171 aaKnown RBP18.8■□□□□ 0.6
COL27A1-207ENST00000494090 SLC35G5Q96KT7 338 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 NFS1Q9Y697 457 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 OAS3Q9Y6K5 1087 aaKnown RBP18.8■□□□□ 0.6
COL27A1-207ENST00000494090 PDPK1O15530 556 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 TAS2R50P59544 299 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 ZNF347Q96SE7 839 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 SYT17Q9BSW7 474 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 TESMINQ9Y4I5 508 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 A8MT66 165 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 CCNKO75909 580 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 CDH1P12830 882 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 AOC1P19801 751 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 IL18Q14116 193 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 CDCA2Q69YH5 1023 aaPredicted RBP18.8■□□□□ 0.6
COL27A1-207ENST00000494090 OLFML1Q6UWY5 402 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 SIX5Q8N196 739 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 SLC35F5Q8WV83 523 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 DIRAS2Q96HU8 199 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 KAT8Q9H7Z6 458 aaKnown RBP18.8■□□□□ 0.6
COL27A1-207ENST00000494090 RBPJLQ9UBG7 517 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 NDRG2Q9UN36 371 aaKnown RBP18.8■□□□□ 0.6
COL27A1-207ENST00000494090 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
COL27A1-207ENST00000494090 FAM240BA0A1B0GVZ2 78 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 NEMP2A6NFY4 417 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 RELL1Q8IUW5 271 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 MEIOBQ8N635 442 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 ZMIZ2Q8NF64 920 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 FCGR1BQ92637 280 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 C8orf48Q96LL4 319 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 CHCHD6Q9BRQ6 235 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 HCN1O60741 890 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 ZNF12P17014 697 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 CPN2P22792 545 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 ADGRG6Q86SQ4 1221 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 HID1Q8IV36 788 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 CDC14AQ9UNH5 594 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 GRK6P43250 576 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 DNASE1L1P49184 302 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 AP3S2P59780 193 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 OLFML2AQ68BL7 652 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 OR13C4Q8NGS5 318 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 SIGLEC1Q9BZZ2 1709 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 DUXAA6NLW8 204 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 SRPRAP08240 638 aaKnown RBP18.79■□□□□ 0.6
COL27A1-207ENST00000494090 SEPHS1P49903 392 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 ARHGAP1Q07960 439 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 MSS51Q4VC12 460 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 PRSS55Q6UWB4 352 aaPredicted RBP18.79■□□□□ 0.6
COL27A1-207ENST00000494090 NUP54Q7Z3B4 507 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 GLIS1Q8NBF1 620 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 OR52B2Q96RD2 323 aa18.79■□□□□ 0.6
COL27A1-207ENST00000494090 GPATCH1Q9BRR8 931 aaKnown RBP18.79■□□□□ 0.6
COL27A1-207ENST00000494090 TCHHQ07283 1943 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 ZNF99A8MXY4 864 aaPredicted RBP18.78■□□□□ 0.6
COL27A1-207ENST00000494090 PAFAH1B3Q15102 231 aaKnown RBP18.78■□□□□ 0.6
COL27A1-207ENST00000494090 PAQR3Q6TCH7 311 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 EFCAB11Q9BUY7 163 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 MRPS30Q9NP92 439 aaKnown RBP18.78■□□□□ 0.6
COL27A1-207ENST00000494090 ABCB8Q9NUT2 735 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 ZNF221Q9UK13 617 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 ILVBLA1L0T0 632 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 TMEM150CB9EJG8 249 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms