RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 THOC5Q13769 683 aaKnown RBP21.93■■□□□ 1.1
SNIP1-203ENST00000493916 TUBB2AQ13885 445 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 LONRF1Q17RB8 773 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 TMTC4Q5T4D3 741 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 UNC5AQ6ZN44 842 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 RASGRP3Q8IV61 690 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 LMNTD2Q8IXW0 634 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 ESX1Q8N693 406 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 ZSCAN1Q8NBB4 408 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 LSM14AQ8ND56 463 aaKnown RBP21.93■■□□□ 1.1
SNIP1-203ENST00000493916 ELMO2Q96JJ3 720 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 BBC3Q96PG8 261 aaPredicted RBP21.93■■□□□ 1.1
SNIP1-203ENST00000493916 TUBB2BQ9BVA1 445 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 FGF21Q9NSA1 209 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 TDRKHQ9Y2W6 561 aaKnown RBP21.93■■□□□ 1.1
SNIP1-203ENST00000493916 S1PR4O95977 384 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 MSL3P1P0C860 447 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 LIFP15018 202 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 PGAM1P18669 254 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 ATP5DP30049 168 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 MORF4L2Q15014 288 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 FBXO38Q6PIJ6 1188 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 SPESP1Q6UW49 350 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 DCUN1D3Q8IWE4 304 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 OR8K5Q8NH50 307 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 GSDMBQ8TAX9 411 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 SOHLH2Q9NX45 425 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 CRYL1Q9Y2S2 319 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 FAM169AQ9Y6X4 670 aa21.92■■□□□ 1.1
SNIP1-203ENST00000493916 SMG1Q96Q15 3661 aaKnown RBP21.92■■□□□ 1.1
SNIP1-203ENST00000493916 PIPSLA2A3N6 862 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 SLC9B1P1A6NJY1 282 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 SMAPO00193 183 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 KIAA0754O94854 1291 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 CHRM5P08912 532 aaPredicted RBP21.91■■□□□ 1.1
SNIP1-203ENST00000493916 PKLRP30613 574 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 STAT5AP42229 794 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 ABRQ12979 859 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 GBX1Q14549 363 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 KYNUQ16719 465 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 C6orf15Q6UXA7 325 aaPredicted RBP21.91■■□□□ 1.1
SNIP1-203ENST00000493916 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.91■■□□□ 1.1
SNIP1-203ENST00000493916 CALML6Q8TD86 181 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 TTC9Q92623 222 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 KIAA1143Q96AT1 154 aaPredicted RBP21.91■■□□□ 1.1
SNIP1-203ENST00000493916 WBP1Q96G27 269 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 NAT9Q9BTE0 207 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 MENTQ9BUN1 341 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 LATS2Q9NRM7 1088 aa21.91■■□□□ 1.1
SNIP1-203ENST00000493916 C20orf96Q9NUD7 363 aaPredicted RBP21.91■■□□□ 1.1
SNIP1-203ENST00000493916 KALRNO60229 2985 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 NIPSNAP2O75323 286 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 TTC4O95801 387 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 PKMP14618 531 aaKnown RBP21.9■■□□□ 1.1
SNIP1-203ENST00000493916 ST6GAL1P15907 406 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 UGT2B7P16662 529 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 SLC1A2P43004 574 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 RAB28P51157 221 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 DHX9Q08211 1270 aaKnown RBP21.9■■□□□ 1.1
SNIP1-203ENST00000493916 CRYMQ14894 314 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 ZNF789Q5FWF6 425 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 KIAA1614Q5VZ46 1190 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 PWWP2BQ6NUJ5 590 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 PCSK4Q6UW60 755 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 DENND6AQ8IWF6 608 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 C17orf53Q8N3J3 647 aaPredicted RBP21.9■■□□□ 1.1
SNIP1-203ENST00000493916 FLVCR1-AS1Q8TAF5 88 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 ZNF501Q96CX3 271 aaPredicted RBP21.9■■□□□ 1.1
SNIP1-203ENST00000493916 TRAPPC9Q96Q05 1148 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 OR2A14Q96R47 310 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 EBNA1BP2Q99848 306 aaKnown RBP21.9■■□□□ 1.1
SNIP1-203ENST00000493916 TRIM51Q9BSJ1 452 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 FAM167BQ9BTA0 163 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 EFHD1Q9BUP0 239 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 SYTL2Q9HCH5 934 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 PLAGL1Q9UM63 463 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 MRFAP1Q9Y605 127 aa21.9■■□□□ 1.1
SNIP1-203ENST00000493916 LOC101059948A0A1B0GTJ6 334 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 TK2O00142 265 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 TTI1O43156 1089 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 TIAF1O95411 115 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 MT-ND3P03897 115 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 ETF1P62495 437 aaKnown RBP21.89■■□□□ 1.09
SNIP1-203ENST00000493916 CTBP1Q13363 440 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 GRB7Q14451 532 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 KIR2DS3Q14952 304 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 GPR19Q15760 415 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 MSS51Q4VC12 460 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 HIBCHQ6NVY1 386 aaPredicted RBP21.89■■□□□ 1.09
SNIP1-203ENST00000493916 GALNT6Q8NCL4 622 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 CFAP61Q8NHU2 1237 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 GPN2Q9H9Y4 310 aaPredicted RBP21.89■■□□□ 1.09
SNIP1-203ENST00000493916 FANCEQ9HB96 536 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 SPHK1Q9NYA1 384 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 LNPEPQ9UIQ6 1025 aa21.89■■□□□ 1.09
SNIP1-203ENST00000493916 MAP3K7O43318 606 aa21.88■■□□□ 1.09
SNIP1-203ENST00000493916 SEC31AO94979 1220 aaKnown RBP21.88■■□□□ 1.09
SNIP1-203ENST00000493916 ITGB2P05107 769 aa21.88■■□□□ 1.09
SNIP1-203ENST00000493916 CHRM3P20309 590 aa21.88■■□□□ 1.09
SNIP1-203ENST00000493916 SPANXN3Q5MJ09 141 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms