RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TRAF3Q13114 568 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 ATP6AP1LQ52LC2 224 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 COQ5Q5HYK3 327 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 ZNF697Q5TEC3 545 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 SULT1C3Q6IMI6 304 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 ZCCHC8Q6NZY4 707 aaKnown RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 IL27RAQ6UWB1 636 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 GRASPQ7Z6J2 395 aaPredicted RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 ZNF786Q8N393 782 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 FNDC5Q8NAU1 212 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 DNAJB14Q8TBM8 379 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 TSPEARQ8WU66 669 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 ULK4Q96C45 1275 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 RHBDF1Q96CC6 855 aa13.49□□□□□ -0.25
VCP-207ENST00000493886 SOX17Q9H6I2 414 aaPredicted RBP13.49□□□□□ -0.25
VCP-207ENST00000493886 IGLV3-16A0A075B6K0 115 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 KCNK10P57789 538 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 UFM1P61960 85 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 PRKCQQ04759 706 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 PDCD4Q53EL6 469 aaKnown RBP13.48□□□□□ -0.25
VCP-207ENST00000493886 PRMT9Q6P2P2 845 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 MILR1Q7Z6M3 343 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 KIAA0907Q7Z7F0 614 aaPredicted RBP13.48□□□□□ -0.25
VCP-207ENST00000493886 CARM1Q86X55 608 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 OFCC1Q8IZS5 231 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 SFRP1Q8N474 314 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 MINDY1Q8N5J2 469 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 OR2T34Q8NGX1 318 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 OR2T3Q8NH03 318 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 CYB5D2Q8WUJ1 264 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 SORCS1Q8WY21 1168 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 ING5Q8WYH8 240 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 HEPHQ9BQS7 1158 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 OSBPL11Q9BXB4 747 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 CD244Q9BZW8 370 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 OLAHQ9NV23 265 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 GID8Q9NWU2 228 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 KLHL42Q9P2K6 505 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 CD84Q9UIB8 345 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 ANGPTL3Q9Y5C1 460 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 FXYD1O00168 92 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 TRMUO75648 421 aaKnown RBP13.48□□□□□ -0.25
VCP-207ENST00000493886 H6PDO95479 791 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 HNRNPA1P09651 372 aaKnown RBP eCLIP13.48□□□□□ -0.25
VCP-207ENST00000493886 CBSLP0DN79 551 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 CBSP35520 551 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 GDF5P43026 501 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 ZFP36L2P47974 494 aaKnown RBP13.48□□□□□ -0.25
VCP-207ENST00000493886 CAMK1Q14012 370 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 ARHGEF7Q14155 803 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 RCAN2Q14206 197 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 CBX2Q14781 532 aaPredicted RBP13.48□□□□□ -0.25
VCP-207ENST00000493886 RABL3Q5HYI8 236 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 PSRC1Q6PGN9 363 aaPredicted RBP13.48□□□□□ -0.25
VCP-207ENST00000493886 BRAT1Q6PJG6 821 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 LPCAT2Q7L5N7 544 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 OTUB2Q96DC9 234 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 EFHD1Q9BUP0 239 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 NDEL1Q9GZM8 345 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 RDH14Q9HBH5 336 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 DUS2Q9NX74 493 aaKnown RBP13.48□□□□□ -0.25
VCP-207ENST00000493886 PKD2L2Q9NZM6 624 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 MARK1Q9P0L2 795 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 ABCD2Q9UBJ2 740 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 OPTCQ9UBM4 332 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 TMPRSS11EQ9UL52 423 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 USP22Q9UPT9 525 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 MYRFQ9Y2G1 1151 aa13.48□□□□□ -0.25
VCP-207ENST00000493886 A0A1W2PP18 115 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 SLC22A3O75751 556 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 OR56A5P0C7T3 313 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 HMOX2P30519 316 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 CCR7P32248 378 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 UBE3AQ05086 875 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 ZNF554Q86TJ5 538 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 EPHX4Q8IUS5 362 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 FRS2Q8WU20 508 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 UBTD2Q8WUN7 234 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 LRRC58Q96CX6 371 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 MRGPRX3Q96LB0 322 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 HBEGFQ99075 208 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 DCUN1D5Q9BTE7 237 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 SMOXQ9NWM0 555 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 ZIM2Q9NZV7 527 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 KLF15Q9UIH9 416 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 ZMYM5Q9UJ78 669 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 RNF103-CHMP3A0A140T963 221 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 DHRS12A0PJE2 317 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 LINC01553A4QN01 128 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 TTC34A8MYJ7 566 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 TMX2-CTNND1H3BSU7 103 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 KDM1AO60341 852 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 LEFTY1O75610 366 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 CDK4P11802 303 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 CEBPBP17676 345 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 GALK1P51570 392 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 PLA2G4EQ3MJ16 856 aa13.47□□□□□ -0.25
VCP-207ENST00000493886 ZBTB46Q86UZ6 589 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms