RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, human

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-223	ENST00000493695	KBTBD8	Q8NFY9	601 aa		3.56	□□□□□ -1.84
SMC4-223	ENST00000493695	SLC22A12	Q96S37	553 aa		3.56	□□□□□ -1.84
SMC4-223	ENST00000493695	SERINC2	Q96SA4	455 aa		3.56	□□□□□ -1.84
SMC4-223	ENST00000493695	DGCR6L	Q9BY27	220 aa		3.56	□□□□□ -1.84
SMC4-223	ENST00000493695	OLFML3	Q9NRN5	406 aa		3.56	□□□□□ -1.84
SMC4-223	ENST00000493695	RARRES3	Q9UL19	164 aa		3.56	□□□□□ -1.84
SMC4-223	ENST00000493695	SLC7A7	Q9UM01	511 aa		3.56	□□□□□ -1.84
SMC4-223	ENST00000493695	R3HDM2	Q9Y2K5	976 aa	Known RBP	3.56	□□□□□ -1.84
SMC4-223	ENST00000493695	IGHV4-61	A0A0C4DH41	118 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	ERAL1	O75616	437 aa	Known RBP	3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	IGHV4-59	P01825	116 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	ADRB2	P07550	413 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	PRLR	P16471	622 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	TRIM21	P19474	475 aa	Known RBP	3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	MSH2	P43246	934 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	RAD52	P43351	418 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	SLC15A1	P46059	708 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	SUOX	P51687	545 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	THOP1	P52888	689 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	MFAP4	P55083	255 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	PSMC6	P62333	389 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	NECTIN1	Q15223	517 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	TPRG1	Q6ZUI0	275 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	GPRIN3	Q6ZVF9	776 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	CEP97	Q8IW35	865 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	SCYL3	Q8IZE3	742 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	GCSAM	Q8N6F7	178 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	SMPDL3B	Q92485	455 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	SLC22A18	Q96BI1	424 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	GAD1	Q99259	594 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	SOST	Q9BQB4	213 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	NUDT16L1	Q9BRJ7	211 aa	Known RBP	3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	RAB11FIP5	Q9BXF6	653 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	TEX12	Q9BXU0	123 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	MAK16	Q9BXY0	300 aa	Known RBP	3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	GIMAP4	Q9NUV9	329 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	TMEM5	Q9Y2B1	443 aa		3.55	□□□□□ -1.84
SMC4-223	ENST00000493695	ASTN2	O75129	1339 aa	Predicted RBP	3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	IGLV9-49	A0A0B4J1Y8	123 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	LNP1	A1A4G5	178 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695		B4DLN1	442 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	ADAMDEC1	O15204	470 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	TMCC2	O75069	709 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	BEST1	O76090	585 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	NXPH2	O95156	264 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	IL11	P20809	199 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	CBL	P22681	906 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	GCH1	P30793	250 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	HNF4A	P41235	474 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	PTGER3	P43115	390 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	PSMC4	P43686	418 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	MRPL12	P52815	198 aa	Known RBP	3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	BAAT	Q14032	418 aa	Predicted RBP	3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	BECN1	Q14457	450 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	TEAD2	Q15562	447 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	GALNT5	Q7Z7M9	940 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	ARID3B	Q8IVW6	561 aa	Predicted RBP	3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	NME8	Q8N427	588 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	SNRNP27	Q8WVK2	155 aa	Known RBP	3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	CALML4	Q96GE6	196 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	PPIL3	Q9H2H8	161 aa	Known RBP	3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	HRH4	Q9H3N8	390 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	PDE7B	Q9NP56	450 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	NUDT4	Q9NZJ9	180 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	PLAGL1	Q9UM63	463 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	PCDHGB4	Q9UN71	923 aa		3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	WBP11	Q9Y2W2	641 aa	Known RBP	3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	3.54	□□□□□ -1.84
SMC4-223	ENST00000493695	GLOD5	A6NK44	160 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	CTDSP2	O14595	271 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	PLPP2	O43688	288 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	ZNF217	O75362	1048 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	GPC4	O75487	556 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	CLDN1	O95832	211 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	GH2	P01242	217 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	IGKV3-15	P01624	115 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	FRMD6-AS1	P0C7T7	363 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	MMP9	P14780	707 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	HRH2	P25021	359 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	EIF2D	P41214	584 aa	Known RBP	3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	IFI35	P80217	286 aa	Predicted RBP	3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	GAGE2B	Q13066	116 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	KCNC3	Q14003	757 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	NTRK2	Q16620	822 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	C15orf59	Q2T9L4	293 aa	Predicted RBP	3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	GLIPR1L2	Q4G1C9	344 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	GAGE2E	Q4V326	116 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	GAGE2A	Q6NT46	116 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	ZNF534	Q76KX8	674 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	ENOSF1	Q7L5Y1	443 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	KRT74	Q7RTS7	529 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	PRPF39	Q86UA1	669 aa	Known RBP	3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	KBTBD6	Q86V97	674 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	LINC00346	Q8IVM7	164 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	TAGAP	Q8N103	731 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	CRYBG2	Q8N1P7	616 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	C17orf53	Q8N3J3	647 aa	Predicted RBP	3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	ZPLD1	Q8TCW7	415 aa		3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	PTPMT1	Q8WUK0	201 aa	Predicted RBP	3.53	□□□□□ -1.84
SMC4-223	ENST00000493695	RASL10A	Q92737	203 aa		3.53	□□□□□ -1.84

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