RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 DEFB110Q30KQ9 67 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 FAM182AQ5T1J6 154 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 KIRREL2Q6UWL6 708 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 GFRALQ6UXV0 394 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 CPNE8Q86YQ8 564 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 ZNF655Q8N720 491 aaPredicted RBP13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 DENND1AQ8TEH3 1009 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 DLG3Q92796 817 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 C14orf79Q96F83 325 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 TAAR6Q96RI8 345 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 SPSB2Q99619 263 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 DEF6Q9H4E7 631 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 COG4Q9H9E3 785 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 LCMT1Q9UIC8 334 aa13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 NXT1Q9UKK6 140 aaKnown RBP13.71□□□□□ -0.21
PRPF40A-211ENST00000493468 ABCA2Q9BZC7 2435 aa13.71□□□□□ -0.22
PRPF40A-211ENST00000493468 TRGV8A0A0C4DH27 118 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 AGAP14A8MT82 685 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 CCL21O00585 134 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 RALBP11234 206 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 PIM1P11309 404 aaPredicted RBP13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 UGT2B7P16662 529 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 ITGAXP20702 1163 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 PTPN3P26045 913 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 RPA4Q13156 261 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 SLC1A5Q15758 541 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 ZNF658BQ4V348 819 aaPredicted RBP13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 TMEM207Q6UWW9 146 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 OVCH1Q7RTY7 1134 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 CDH24Q86UP0 819 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 CATSPER1Q8NEC5 780 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 OR1N1Q8NGS0 311 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 BLOC1S5Q8TDH9 187 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 RAPGEF5Q92565 580 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 THOC3Q96J01 351 aaKnown RBP13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 OR2A14Q96R47 310 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 NRTNQ99748 197 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 SEMA3GQ9NS98 782 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 ANO10Q9NW15 660 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 UBP1Q9NZI7 540 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 ABI3Q9P2A4 366 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 PLCL2Q9UPR0 1127 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 ICKQ9UPZ9 632 aa13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 BZW2Q9Y6E2 419 aaKnown RBP13.7□□□□□ -0.22
PRPF40A-211ENST00000493468 TRAV17A0A0B4J275 112 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 A0A0J9YY10 115 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 A0A1B0GX78 115 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 APOL1O14791 398 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 STX7O15400 261 aaKnown RBP13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 PRICKLE3O43900 615 aaPredicted RBP13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 SRP72O76094 671 aaKnown RBP13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 CTSBP07858 339 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 ZFXP17010 805 aaPredicted RBP13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 CD68P34810 354 aaPredicted RBP13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 SHMT2P34897 504 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 PBX1P40424 430 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 CHRNA4P43681 627 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 TNFSF10P50591 281 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 ARSFP54793 590 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 Q0VFX4 171 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 NKG7Q16617 165 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 LINC00696Q6ZRV3 163 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 TRIM73Q86UV7 250 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 DNAJC22Q8N4W6 341 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 OR11G2Q8NGC1 345 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 FLVCR1-AS1Q8TAF5 88 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 NAT14Q8WUY8 206 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 HEXDCQ8WVB3 486 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 DCUN1D1Q96GG9 259 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 MRGPRX2Q96LB1 330 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 MAGEB10Q96LZ2 347 aaPredicted RBP13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 HGH1Q9BTY7 390 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 XKR8Q9H6D3 395 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 ASB8Q9H765 288 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 ENAMQ9NRM1 1142 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 NIPBLQ6KC79 2804 aaeCLIP13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 DNHD1Q96M86 4753 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 SPG11Q96JI7 2443 aa13.69□□□□□ -0.22
PRPF40A-211ENST00000493468 DYTNA2CJ06 578 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 C3orf70A6NLC5 250 aaPredicted RBP13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 CFAP99D6REC4 459 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 BUD23O43709 281 aaKnown RBP13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 KLHL18O94889 574 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 HPP00738 406 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 SOX11P35716 441 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 ARG2P78540 354 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 RBBP7Q16576 425 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 FIGNQ5HY92 759 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 COX15Q7KZN9 410 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 SLC25A41Q8N5S1 370 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 DNAJB8Q8NHS0 232 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 CPLX3Q8WVH0 158 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 TFGQ92734 400 aaPredicted RBP13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 ULK4Q96C45 1275 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 VPS37BQ9H9H4 285 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 IRAK4Q9NWZ3 460 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 OR6C2Q9NZP2 312 aa13.68□□□□□ -0.22
PRPF40A-211ENST00000493468 UVRAGQ9P2Y5 699 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms