RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 NXPE1Q8N323 547 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 NRTNQ99748 197 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 C19orf43Q9BQ61 176 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 ANP32EQ9BTT0 268 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 SPRTNQ9H040 489 aaPredicted RBP17.04■□□□□ 0.32
NUP50-218ENST00000493456 XKR8Q9H6D3 395 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 EPS8L2Q9H6S3 715 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 SLC6A20Q9NP91 592 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 SAE1Q9UBE0 346 aaPredicted RBP17.04■□□□□ 0.32
NUP50-218ENST00000493456 RSPH14Q9UHP6 348 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 FBXL4Q9UKA2 621 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 ZFHX3Q15911 3703 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 GSTM1P09488 218 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 PECAM1P16284 738 aaPredicted RBP17.03■□□□□ 0.32
NUP50-218ENST00000493456 UGT2B7P16662 529 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 ITGALP20701 1170 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 GRNP28799 593 aaKnown RBP17.03■□□□□ 0.32
NUP50-218ENST00000493456 SHMT2P34897 504 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 CDKN2BP42772 138 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 XIAPP98170 497 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 GSTM4Q03013 218 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 SLC9A5Q14940 896 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 TLR1Q15399 786 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 ZIC1Q15915 447 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 FAM180AQ6UWF9 173 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 MFSD7Q6UXD7 560 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 ZNF655Q8N720 491 aaPredicted RBP17.03■□□□□ 0.32
NUP50-218ENST00000493456 PHC3Q8NDX5 983 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 SLC35G2Q8TBE7 412 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 TFGQ92734 400 aaPredicted RBP17.03■□□□□ 0.32
NUP50-218ENST00000493456 DLG3Q92796 817 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 FKBP10Q96AY3 582 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 SLX1AQ9BQ83 275 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 NDC1Q9BTX1 674 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 IRAK4Q9NWZ3 460 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 COPG2Q9UBF2 871 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 TRHDEQ9UKU6 1024 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 ICKQ9UPZ9 632 aa17.03■□□□□ 0.32
NUP50-218ENST00000493456 A0A0J9YY10 115 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 HCRTR1O43613 425 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 CST8O60676 142 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 GYPCP04921 128 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 ATXN8OSP0DMR3 200 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 SLC1A1P43005 524 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 GEMP55040 296 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 FOXL2P58012 376 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 PRKG2Q13237 762 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 TAZQ16635 292 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 SNX20Q7Z614 316 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 TRIM73Q86UV7 250 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 ZC3H18Q86VM9 953 aaKnown RBP17.02■□□□□ 0.32
NUP50-218ENST00000493456 FJX1Q86VR8 437 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 DENND1AQ8TEH3 1009 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 P3H4Q92791 437 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 VPS50Q96JG6 964 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 CNDP1Q96KN2 507 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 QKIQ96PU8 341 aaKnown RBP eCLIP17.02■□□□□ 0.32
NUP50-218ENST00000493456 OR2A14Q96R47 310 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 FICDQ9BVA6 458 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 WDR54Q9H977 334 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 MRM3Q9HC36 420 aaKnown RBP17.02■□□□□ 0.32
NUP50-218ENST00000493456 CDC23Q9UJX2 597 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 GTF3C3Q9Y5Q9 886 aa17.02■□□□□ 0.32
NUP50-218ENST00000493456 KLF2Q9Y5W3 355 aaPredicted RBP17.02■□□□□ 0.32
NUP50-218ENST00000493456 IGLV3-16A0A075B6K0 115 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 HACD1B0YJ81 288 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 ANXA9O76027 345 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 CRTAMO95727 393 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 AGTP01019 485 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 ALBP02768 609 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 PDHA2P29803 388 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 PTGER4P35408 488 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 FANCCQ00597 558 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 OTUD4Q01804 1114 aaKnown RBP17.01■□□□□ 0.31
NUP50-218ENST00000493456 ART3Q13508 389 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 IQCB1Q15051 598 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 ZXDCQ2QGD7 858 aaPredicted RBP17.01■□□□□ 0.31
NUP50-218ENST00000493456 GPR33Q49SQ1 333 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 RPUSD3Q6P087 351 aaKnown RBP17.01■□□□□ 0.31
NUP50-218ENST00000493456 UNC5AQ6ZN44 842 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 RHOT2Q8IXI1 618 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 BCORP1Q8N888 145 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 LHPPQ9H008 270 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 GBA3Q9H227 469 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 OLAHQ9NV23 265 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 OR6C2Q9NZP2 312 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 PLCL2Q9UPR0 1127 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 F8P00451 2351 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 CCDC88CQ9P219 2028 aa17.01■□□□□ 0.31
NUP50-218ENST00000493456 SOCS6O14544 535 aa17■□□□□ 0.31
NUP50-218ENST00000493456 CHRM5P08912 532 aaPredicted RBP17■□□□□ 0.31
NUP50-218ENST00000493456 PIM1P11309 404 aaPredicted RBP17■□□□□ 0.31
NUP50-218ENST00000493456 ACRV1P26436 265 aa17■□□□□ 0.31
NUP50-218ENST00000493456 ZNF140P52738 457 aaPredicted RBP17■□□□□ 0.31
NUP50-218ENST00000493456 ARSFP54793 590 aa17■□□□□ 0.31
NUP50-218ENST00000493456 UBASH3AP57075 661 aa17■□□□□ 0.31
NUP50-218ENST00000493456 TPM4P67936 248 aa17■□□□□ 0.31
NUP50-218ENST00000493456 SLC5A12Q1EHB4 618 aa17■□□□□ 0.31
NUP50-218ENST00000493456 RANBP10Q6VN20 620 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms