RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 USP39Q53GS9 565 aaKnown RBP18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 LRRC73Q5JTD7 316 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 SPANXN4Q5MJ08 99 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 UBE2R2Q712K3 238 aaPredicted RBP18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 TRIML2Q8N7C3 387 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 CHST14Q8NCH0 376 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 OSCP1Q8WVF1 389 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 ASB11Q8WXH4 323 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 CCDC115Q96NT0 180 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 ACPTQ9BZG2 426 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 PARVBQ9HBI1 364 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 C1orf109Q9NX04 203 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 V9GYQ6 96 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 NUAK1O60285 661 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 EFCAB14O75071 495 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 KRT6AP02538 564 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 KRT6BP04259 564 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 ADH1AP07327 375 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 ALDH3B2P48448 385 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 KRT6CP48668 564 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 CPSF6Q16630 551 aaKnown RBP eCLIP18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 AADATQ8N5Z0 425 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 KRTCAP2Q8N6L1 136 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 BDH2Q9BUT1 245 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 GORASP2Q9H8Y8 452 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 ACTR8Q9H981 624 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 CD320Q9NPF0 282 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 HCFC1R1Q9NWW0 138 aa18.45■□□□□ 0.54
TSC22D4-205ENST00000493217 CCDC160A6NGH7 325 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 NEDD8-MDP1E9PL57 170 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 CCL16O15467 120 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 C8GP07360 202 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 ANXA6P08133 673 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 ATP1B2P14415 290 aaPredicted RBP18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 KCTD21Q4G0X4 260 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 Q6ZVU0 165 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 LRRC70Q7Z2Q7 622 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 VRK3Q8IV63 474 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 MSRB3Q8IXL7 192 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 MTFMTQ96DP5 389 aaKnown RBP18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 SH3GL3Q99963 347 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 EMILIN2Q9BXX0 1053 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 SLC25A37Q9NYZ2 338 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 PCDH10Q9P2E7 1040 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 CEPT1Q9Y6K0 416 aa18.44■□□□□ 0.54
TSC22D4-205ENST00000493217 A0A1W2PQ67 120 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 CLOCKO15516 846 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 PRSS23O95084 383 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 PDYNP01213 254 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 PABPC1P11940 636 aaKnown RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 BCKDHAP12694 445 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 RPS9P46781 194 aaKnown RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 POLR2LP62875 67 aaKnown RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 GGTA1PQ4G0N0 100 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 CYBRD1Q53TN4 286 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 B3GNT6Q6ZMB0 384 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 DET1Q7L5Y6 550 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 TCAIMQ8N3R3 496 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 OR2T12Q8NG77 320 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 OR2A12Q8NGT7 310 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 ITFG1Q8TB96 612 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 IKZF5Q9H5V7 419 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 NTN4Q9HB63 628 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 SMPD3Q9NY59 655 aaPredicted RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 CD84Q9UIB8 345 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 HELZP42694 1942 aaKnown RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 TRIM64A6NGJ6 449 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 WASH3PC4AMC7 463 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 H3BSA7 217 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 AREL1O15033 823 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 TIMP1P01033 207 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 RAP2AP10114 183 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 ACRP10323 421 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 CDH2P19022 906 aaPredicted RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 RPL10P27635 214 aaKnown RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 SLC6A12P48065 614 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 HNMTP50135 292 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 CYP4F3Q08477 520 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 DYNC1I2Q13409 638 aaKnown RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 TBPL2Q6SJ96 375 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 GDPD4Q6W3E5 623 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 ALDH16A1Q8IZ83 802 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 ZNF548Q8NEK5 533 aaPredicted RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 OR10A6Q8NH74 314 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 MAGEE2Q8TD90 523 aaPredicted RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 TCEAL4Q96EI5 215 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 VPS50Q96JG6 964 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 THUMPD3Q9BV44 507 aaKnown RBP18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 BBS2Q9BXC9 721 aa18.43■□□□□ 0.54
TSC22D4-205ENST00000493217 CROCCQ5TZA2 2017 aa18.42■□□□□ 0.54
TSC22D4-205ENST00000493217 KCNE1BA0A087WTH5 132 aa18.42■□□□□ 0.54
TSC22D4-205ENST00000493217 TRIM64CA6NLI5 447 aa18.42■□□□□ 0.54
TSC22D4-205ENST00000493217 GFYI3L273 518 aa18.42■□□□□ 0.54
TSC22D4-205ENST00000493217 UPK1AO00322 258 aa18.42■□□□□ 0.54
TSC22D4-205ENST00000493217 HIST1H2AGP0C0S8 130 aaPredicted RBP18.42■□□□□ 0.54
TSC22D4-205ENST00000493217 HIST1H2ADP20671 130 aa18.42■□□□□ 0.54
TSC22D4-205ENST00000493217 TTC33Q6PID6 262 aaPredicted RBP18.42■□□□□ 0.54
TSC22D4-205ENST00000493217 ADIPOR2Q86V24 386 aa18.42■□□□□ 0.54
TSC22D4-205ENST00000493217 KLHL23Q8NBE8 558 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms