RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 REEP5Q00765 189 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 IRF9Q00978 393 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 FOXM1Q08050 763 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 FCHO2Q0JRZ9 810 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 KCNMA1Q12791 1236 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ILF2Q12905 390 aaKnown RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TRAF2Q12933 501 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TSPAN31Q12999 210 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 MRPL49Q13405 166 aaKnown RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TUSC3Q13454 348 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 NR0B2Q15466 257 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 UAP1Q16222 522 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CAMK4Q16566 473 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 MAN2A1Q16706 1144 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CA9Q16790 459 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PCK2Q16822 640 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ALKBH6Q3KRA9 238 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 GALNTL6Q49A17 601 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 IFI44LQ53G44 452 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TCHHL1Q5QJ38 904 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CCNYL2Q5T2Q4 361 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PDZK1Q5T2W1 519 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 HES5Q5TA89 166 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 LIPMQ5VYY2 423 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CPZQ66K79 652 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 DENND2CQ68D51 928 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 NCR3LG1Q68D85 454 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 GPAT2Q6NUI2 795 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 FUT10Q6P4F1 479 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 BRAT1Q6PJG6 821 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 LYPD4Q6UWN0 246 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CWC27Q6UX04 472 aaKnown RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 KCTD8Q6ZWB6 473 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ERICH1Q86X53 443 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PPP1R3BQ86XI6 285 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ECHDC2Q86YB7 292 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 GID4Q8IVV7 300 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PRSS58Q8IYP2 241 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 MMP21Q8N119 569 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 UBE2J2Q8N2K1 259 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 GUF1Q8N442 669 aaKnown RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TRAM1L1Q8N609 369 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 DCBLD1Q8N8Z6 715 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CLEC1AQ8NC01 280 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CPEB3Q8NE35 698 aaKnown RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM185AQ8NFB2 350 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 OR52B4Q8NGK2 314 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 OR4A15Q8NGL6 344 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 OR2I1PQ8NGU4 316 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 OCC1Q8TAD7 63 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 DNAJB14Q8TBM8 379 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 SETD7Q8WTS6 366 aaKnown RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 GLYATL2Q8WU03 294 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ESR2Q92731 530 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 GTPBP3Q969Y2 492 aaKnown RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 MCUR1Q96AQ8 359 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PLPPR2Q96GM1 343 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 LRIG1Q96JA1 1093 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF521Q96K83 1311 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PBKQ96KB5 322 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF583Q96ND8 569 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 DPH1Q9BZG8 443 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 BHLHE41Q9C0J9 482 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 MAGT1Q9H0U3 335 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 GOLPH3LQ9H4A5 285 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 DPEP2Q9H4A9 486 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PDZD7Q9H5P4 517 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 IPPKQ9H8X2 491 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 AKIRIN1Q9H9L7 192 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 GPAMQ9HCL2 828 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ZFP14Q9HCL3 533 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 C20orf96Q9NUD7 363 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 EXD2Q9NVH0 621 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 PAG1Q9NWQ8 432 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 NDE1Q9NXR1 346 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 KCND2Q9NZV8 630 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 NYAP2Q9P242 653 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF212Q9UDV6 495 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 FBXL17Q9UF56 701 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 RGS17Q9UGC6 210 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 SRRDQ9UH36 339 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 MAGEL2Q9UJ55 1249 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 CRLS1Q9UJA2 301 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 NOCTQ9UK39 431 aaKnown RBP4.13□□□□□ -1.75
BRCA1-220ENST00000492859 UTS2RQ9UKP6 389 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 RAB23Q9ULC3 237 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 TBC1D24Q9ULP9 559 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 SLC5A6Q9Y289 635 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 POFUT2Q9Y2G5 429 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF281Q9Y2X9 895 aa4.13□□□□□ -1.75
BRCA1-220ENST00000492859 ZMYM3Q14202 1370 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 LOC102723996A0A087X1L8 192 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 A0A0A6YYH2 397 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 A0A1W2PQF6 199 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 A0A1W2PQM1 296 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PLSCR5A0PG75 271 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PIPSLA2A3N6 862 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 A6NJ64 397 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 NPIPB13A6NJU9 1138 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms