RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 OTUD4Q01804 1114 aaKnown RBP8.84□□□□□ -0.99
HDAC3-212ENST00000492407 CACNG1Q06432 222 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 ABRQ12979 859 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 ITIH4Q14624 930 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 PTPRCAPQ14761 206 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 NADK2Q4G0N4 442 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 MFSD4BQ5TF39 518 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 VWA5B1Q5TIE3 1220 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 ZNF385CQ66K41 422 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-212ENST00000492407 CPZQ66K79 652 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 KCTD11Q693B1 232 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 RHBDD2Q6NTF9 364 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 DUS1LQ6P1R4 473 aaKnown RBP8.84□□□□□ -0.99
HDAC3-212ENST00000492407 DARS2Q6PI48 645 aaKnown RBP8.84□□□□□ -0.99
HDAC3-212ENST00000492407 SPESP1Q6UW49 350 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 FAM198BQ6UWH4 519 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 PACS1Q6VY07 963 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 HOOK3Q86VS8 718 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 LMNTD2Q8IXW0 634 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 TBC1D21Q8IYX1 336 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 ADGRF3Q8IZF5 1079 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 ZBTB2Q8N680 514 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 TC2NQ8N9U0 490 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 OR52E1Q8NGJ3 308 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 OR13C4Q8NGS5 318 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 SSC4DQ8WTU2 575 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 STYXQ8WUJ0 223 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 TM9SF4Q92544 642 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 TFGQ92734 400 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-212ENST00000492407 KRT35Q92764 455 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 HEMGNQ9BXL5 484 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 TLR10Q9BXR5 811 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 AP1M1Q9BXS5 423 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 SLC7A5P2Q9GIP4 190 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 LRRC40Q9H9A6 602 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 SLAMF7Q9NQ25 335 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 ENAMQ9NRM1 1142 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 NLE1Q9NVX2 485 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-212ENST00000492407 ETAA1Q9NY74 926 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 GPR83Q9NYM4 423 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 SRPK3Q9UPE1 567 aa8.84□□□□□ -0.99
HDAC3-212ENST00000492407 ZNF106Q9H2Y7 1883 aaKnown RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 WIPF3A6NGB9 483 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 ERI2A8K979 691 aaKnown RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 F5H423 210 aaPredicted RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 H3BMH7 237 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 KCNN4O15554 427 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 ZNF749O43361 778 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 ABCB7O75027 752 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 KLF7O75840 302 aaPredicted RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 FTH1P02794 183 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 ALPPP05187 535 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 PSMB4P28070 264 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 MC4RP32245 332 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 MARCKSL1P49006 195 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 DCDP81605 110 aaKnown RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 KIR2DS3Q14952 304 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 LLGL1Q15334 1064 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 PDCD2Q16342 344 aaPredicted RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 P3H1Q32P28 736 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 CCDC92Q53HC0 331 aaPredicted RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 LYPLAL1Q5VWZ2 237 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 LCN10Q6JVE6 187 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 TLDC1Q6P9B6 456 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 CDHR3Q6ZTQ4 885 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 LINC00523Q86TU6 105 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 TAX1BP1Q86VP1 789 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 LCA5Q86VQ0 697 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 SERPINA9Q86WD7 417 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 C19orf47Q8N9M1 422 aaKnown RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 FDCSPQ8NFU4 85 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 COG1Q8WTW3 980 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 CDKN2AIPNLQ96HQ2 116 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 ALS2CR12Q96Q35 445 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 TTC1Q99614 292 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 TSPY26PQ9H489 355 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 ACTR10Q9NZ32 417 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 PLEKHB1Q9UF11 243 aaPredicted RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 RIMKLBQ9ULI2 386 aa8.83□□□□□ -1
HDAC3-212ENST00000492407 USP9XQ93008 2570 aaPredicted RBP8.83□□□□□ -1
HDAC3-212ENST00000492407 GOLGA6L9A6NEM1 432 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 MROH6A6NGR9 719 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 PEX12O00623 359 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 OR2B3O76000 313 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 FKBP9O95302 570 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 AP2A1O95782 977 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 ONECUT2O95948 504 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 ATXN8OSP0DMR3 200 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 PIM1P11309 404 aaPredicted RBP8.82□□□□□ -1
HDAC3-212ENST00000492407 IMPDH2P12268 514 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 ACADLP28330 430 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 PDHA2P29803 388 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 STIP1P31948 543 aaKnown RBP8.82□□□□□ -1
HDAC3-212ENST00000492407 UQCRFS1P47985 274 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 GABRA4P48169 554 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 ARCN1P48444 511 aaKnown RBP8.82□□□□□ -1
HDAC3-212ENST00000492407 SESN3P58005 492 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 CHAF1BQ13112 559 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 MYBPC3Q14896 1274 aa8.82□□□□□ -1
HDAC3-212ENST00000492407 SLC5A12Q1EHB4 618 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms