RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 EMCNQ9ULC0 261 aa9.23□□□□□ -0.93
BRCA1-219ENST00000491747 ARHGEF17Q96PE2 2063 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 NEMP2A6NFY4 417 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 LMO7DNF2Z398 122 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 GAPDHSO14556 408 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 GPR39O43194 453 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 HYAL3O43820 417 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 RALBP11234 206 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 CTSEP14091 401 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 TPH1P17752 444 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 KELP23276 732 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 ACADVLP49748 655 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 BLKP51451 505 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 MTTPP55157 894 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 CLDN6P56747 220 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 DCDC1P59894 354 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 ABCE1P61221 599 aaKnown RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 ITGA9Q13797 1035 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 GRAMD1BQ3KR37 738 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 CCDC157Q569K6 752 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 TCHHL1Q5QJ38 904 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 PACS1Q6VY07 963 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 GLT6D1Q7Z4J2 308 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 RAB44Q7Z6P3 723 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 SPATA24Q86W54 205 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 MARCH9Q86YJ5 346 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 HPS6Q86YV9 775 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 C10orf107Q8IVU9 208 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 HIPK4Q8NE63 616 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 SCARF2Q96GP6 870 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 SORT1Q99523 831 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 CARS2Q9HA77 564 aaKnown RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 ARNT2Q9HBZ2 717 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 C6orf203Q9P0P8 240 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 NFKBIL1Q9UBC1 381 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 LOC100653049A0A140TA62 436 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 A0A1B0GVG6 124 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 CASC3O15234 703 aaKnown RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF189O75820 626 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 KRT34O76011 436 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 AP2A1O95782 977 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 ITGA2BP08514 1039 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 CKMT2P17540 419 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 ITGAXP20702 1163 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 FDFT1P37268 417 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 GRIA1P42261 906 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 GNPDA1P46926 289 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 FOLH1Q04609 750 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 CCDC153Q494R4 210 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 METTL21CQ5VZV1 264 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 FRMD7Q6ZUT3 714 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 MAVSQ7Z434 540 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 TRAM1L1Q8N609 369 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 FAM181AQ8N9Y4 354 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 FAM81AQ8TBF8 368 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 SREK1Q8WXA9 508 aaKnown RBP9.22□□□□□ -0.93
BRCA1-219ENST00000491747 ADAMTS14Q8WXS8 1223 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 SERPINI1Q99574 410 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 BOCQ9BWV1 1114 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 IL26Q9NPH9 171 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 PNPOQ9NVS9 261 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 HACD3Q9P035 362 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 PRKAB1Q9Y478 270 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 DTNAQ9Y4J8 743 aa9.22□□□□□ -0.93
BRCA1-219ENST00000491747 AKAP13Q12802 2813 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 C15orf38-AP3S2A0A0A6YYH1 394 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 ANXA6P08133 673 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 CKMT1AP12532 417 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 ETS2P15036 469 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 PGAM1P18669 254 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 UGT1A6P19224 532 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 UGT1A1P22309 533 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 UGT1A4P22310 534 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 ACP1P24666 158 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 AK4P27144 223 aaPredicted RBP9.21□□□□□ -0.93
BRCA1-219ENST00000491747 TYK2P29597 1187 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 UGT1A3P35503 534 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 UGT1A5P35504 534 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 CLCN2P51788 898 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 ELOCQ15369 112 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 TAF1AQ15573 450 aaPredicted RBP9.21□□□□□ -0.93
BRCA1-219ENST00000491747 ATP13A5Q4VNC0 1218 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 C6orf132Q5T0Z8 1188 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 OGFRL1Q5TC84 451 aaPredicted RBP9.21□□□□□ -0.93
BRCA1-219ENST00000491747 UGT2A3Q6UWM9 527 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 DHRS13Q6UX07 377 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 ARPINQ7Z6K5 226 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 SLC35F3Q8IY50 421 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 FSTL5Q8N475 847 aaPredicted RBP9.21□□□□□ -0.93
BRCA1-219ENST00000491747 OR13C4Q8NGS5 318 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 GPBAR1Q8TDU6 330 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 DGCR14Q96DF8 476 aaKnown RBP9.21□□□□□ -0.93
BRCA1-219ENST00000491747 PLEKHG4BQ96PX9 1271 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 DUSP23Q9BVJ7 150 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 SHCBP1LQ9BZQ2 653 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 LRRC40Q9H9A6 602 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 ATXN10Q9UBB4 475 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 BCAP29Q9UHQ4 241 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 KLK13Q9UKR3 277 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 TMCO1Q9UM00 188 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms