RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.91□□□□□ -1.14
USP39-216ENST00000490193 RELTQ969Z4 430 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 FKBP10Q96AY3 582 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 OXNAD1Q96HP4 312 aaPredicted RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 NAP1L5Q96NT1 182 aaPredicted RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 FCRL5Q96RD9 977 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 TRIM56Q9BRZ2 755 aaKnown RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 NAT10Q9H0A0 1025 aaKnown RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 OR52A5Q9H2C5 316 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 MVB12BQ9H7P6 319 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 FAM60AQ9NP50 221 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 ACTR10Q9NZ32 417 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 CTTNBP2NLQ9P2B4 639 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 IFT80Q9P2H3 777 aaPredicted RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 NDOR1Q9UHB4 597 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 CDYLQ9Y232 598 aa7.91□□□□□ -1.14
USP39-216ENST00000490193 KLF2Q9Y5W3 355 aaPredicted RBP7.91□□□□□ -1.14
USP39-216ENST00000490193 IGLV3-16A0A075B6K0 115 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 SMTNL1A8MU46 457 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 MASP2O00187 686 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 STX7O15400 261 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 ZSCAN9O15535 394 aaPredicted RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 HCRTR1O43613 425 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 BUD23O43709 281 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 SRP72O76094 671 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 ONECUT2O95948 504 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 POLBP06746 335 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 H2AFZP0C0S5 128 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 RALBP11234 206 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 SNRPBP14678 240 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 PBX1P40424 430 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 TNNT3P45378 269 aaPredicted RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 NR2C2P49116 596 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 ZBED6P86452 979 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 XIAPP98170 497 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 OTUD4Q01804 1114 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 TYRO3Q06418 890 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 RPA4Q13156 261 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 MPP3Q13368 585 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 BOP1Q14137 746 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 ZNF169Q14929 603 aaPredicted RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 TLR1Q15399 786 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 NFKBIBQ15653 356 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 ZIC1Q15915 447 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 HIF1AQ16665 826 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 ZXDCQ2QGD7 858 aaPredicted RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 LRRC38Q5VT99 294 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 C1orf189Q5VU69 101 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 AGAP7PQ5VUJ5 663 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 ZNF324BQ6AW86 544 aaPredicted RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 TLDC1Q6P9B6 456 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 H2AFVQ71UI9 128 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 BZW1Q7L1Q6 419 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 GDF7Q7Z4P5 450 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 SLC25A41Q8N5S1 370 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 FLVCR1-AS1Q8TAF5 88 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 HEXDCQ8WVB3 486 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 TFB1MQ8WVM0 346 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 CTNNBL1Q8WYA6 563 aaPredicted RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 IQCDQ96DY2 449 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 AGAP4Q96P64 663 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 FERD3LQ96RJ6 166 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 VAT1Q99536 393 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 MAK16Q9BXY0 300 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 SLC26A1Q9H2B4 701 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 ASB8Q9H765 288 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 WDR54Q9H977 334 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 COG4Q9H9E3 785 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 SLC6A20Q9NP91 592 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 SLC22A11Q9NSA0 550 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 COPG2Q9UBF2 871 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 DHCR7Q9UBM7 475 aaKnown RBP7.9□□□□□ -1.14
USP39-216ENST00000490193 FAM8A1Q9UBU6 413 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 FBXL4Q9UKA2 621 aa7.9□□□□□ -1.14
USP39-216ENST00000490193 PKDREJQ9NTG1 2253 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 C5orf60A6NFR6 353 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 IFRD1O00458 451 aaPredicted RBP7.89□□□□□ -1.15
USP39-216ENST00000490193 SOCS6O14544 535 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 ALBP02768 609 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 GSTM1P09488 218 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 ATP1B2P14415 290 aaPredicted RBP7.89□□□□□ -1.15
USP39-216ENST00000490193 UGT2B7P16662 529 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 SHMT2P34897 504 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 TDGF1P3P51864 188 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 GSTM4Q03013 218 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 CDC16Q13042 620 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 PTPRCAPQ14761 206 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 TAF1AQ15573 450 aaPredicted RBP7.89□□□□□ -1.15
USP39-216ENST00000490193 TAZQ16635 292 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 SLC5A12Q1EHB4 618 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 DEFB110Q30KQ9 67 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 MYO7BQ6PIF6 2116 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 FAM180AQ6UWF9 173 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 ZC3H18Q86VM9 953 aaKnown RBP7.89□□□□□ -1.15
USP39-216ENST00000490193 FJX1Q86VR8 437 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 RFX6Q8HWS3 928 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 TMEM151BQ8IW70 566 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 ZNF567Q8N184 647 aa7.89□□□□□ -1.15
USP39-216ENST00000490193 NXPE1Q8N323 547 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms