RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TMEM92Q6UXU6 159 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 NCCRP1Q6ZVX7 275 aaPredicted RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 CHST15Q7LFX5 561 aaPredicted RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 DSG4Q86SJ6 1040 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 RETREG3Q86VR2 466 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 OFCC1Q8IZS5 231 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 FAM45AQ8TCE6 357 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 GABRG3Q99928 467 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 MRPL46Q9H2W6 279 aaKnown RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 POLR1BQ9H9Y6 1135 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 MRM3Q9HC36 420 aaKnown RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 DYRK4Q9NR20 520 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 SERGEFQ9UGK8 458 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 FKBPLQ9UIM3 349 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 ATP6AP2A0A1C7CYW4 349 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 MAN2B1O00754 1011 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 GPC4O75487 556 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 ATP6AP2O75787 350 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 OCM2P0CE71 109 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 OCMP0CE72 109 aaPredicted RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 STMN1P16949 149 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 DCKP27707 260 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 HMGCLP35914 325 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 PTSQ03393 145 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 CNTN1Q12860 1018 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 CST6Q15828 149 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 FUNDC1Q8IVP5 155 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 TNIP2Q8NFZ5 429 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 CYGBQ8WWM9 190 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 CDKN2AIPNLQ96HQ2 116 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 ELMO2Q96JJ3 720 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 ASB2Q96Q27 587 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 MCCC1Q96RQ3 725 aaPredicted RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 DOK1Q99704 481 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 WRAP53Q9BUR4 548 aaKnown RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 SOX17Q9H6I2 414 aaPredicted RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 CCM2LQ9NUG4 571 aaPredicted RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 C2orf42Q9NWW7 574 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 EGFL7Q9UHF1 273 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 PTBP2Q9UKA9 531 aaKnown RBP13.03□□□□□ -0.32
CHD1L-208ENST00000488864 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
CHD1L-208ENST00000488864 CCDC162PA2VCL2 907 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 C1QTNF3-AMACRE9PGA6 284 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 J3QRK9 145 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 K7EPI3 171 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 NME4O00746 187 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 NPC1O15118 1278 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 GOT2P00505 430 aaKnown RBP13.02□□□□□ -0.32
CHD1L-208ENST00000488864 CHRNB1P11230 501 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 PAMP19021 973 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 TSPAN8P19075 237 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 ITGB7P26010 798 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 YAP1P46937 504 aaKnown RBP13.02□□□□□ -0.32
CHD1L-208ENST00000488864 MRPS21P82921 87 aaKnown RBP13.02□□□□□ -0.32
CHD1L-208ENST00000488864 GSTM4Q03013 218 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 ATP1A4Q13733 1029 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 FBXO43Q4G163 708 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 C1QTNF12Q5T7M4 302 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 INTS11Q5TA45 600 aaKnown RBP13.02□□□□□ -0.32
CHD1L-208ENST00000488864 KIAA0930Q6ICG6 404 aaPredicted RBP13.02□□□□□ -0.32
CHD1L-208ENST00000488864 ANKRD26P1Q6NSI1 321 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 CYHR1Q6ZMK1 362 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 PIWIL4Q7Z3Z4 852 aaKnown RBP13.02□□□□□ -0.32
CHD1L-208ENST00000488864 CUZD1Q86UP6 607 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 AADATQ8N5Z0 425 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 FBXL8Q96CD0 374 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 SLC25A23Q9BV35 468 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 RSPH9Q9H1X1 276 aaPredicted RBP13.02□□□□□ -0.32
CHD1L-208ENST00000488864 LMAN1LQ9HAT1 526 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 HACD3Q9P035 362 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 IL17CQ9P0M4 197 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 DKK3Q9UBP4 350 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 CD84Q9UIB8 345 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 PPIL1Q9Y3C6 166 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 PKP3Q9Y446 797 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 CORINQ9Y5Q5 1042 aa13.02□□□□□ -0.32
CHD1L-208ENST00000488864 A0A1W2PP55 124 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 RPP40O75818 363 aaKnown RBP13.02□□□□□ -0.33
CHD1L-208ENST00000488864 PAPSS2O95340 614 aaPredicted RBP13.02□□□□□ -0.33
CHD1L-208ENST00000488864 ADRB3P13945 408 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 ATP5F1P24539 256 aaPredicted RBP13.02□□□□□ -0.33
CHD1L-208ENST00000488864 OXTRP30559 389 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 DRD3P35462 400 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 P2RY2P41231 377 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 CDKN1CP49918 316 aaPredicted RBP13.02□□□□□ -0.33
CHD1L-208ENST00000488864 BMXP51813 675 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 DNAJB13P59910 316 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 ARHGEF7Q14155 803 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 CSHL1Q14406 222 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 PDCD4Q53EL6 469 aaKnown RBP13.02□□□□□ -0.33
CHD1L-208ENST00000488864 ZNF470Q6ECI4 717 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 CLEC6AQ6EIG7 209 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 GJD3Q8N144 294 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 MSANTD3Q96H12 275 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 PPP1R16AQ96I34 528 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 MRPL57Q9BQC6 102 aaKnown RBP13.02□□□□□ -0.33
CHD1L-208ENST00000488864 TRIM8Q9BZR9 551 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 CD93Q9NPY3 652 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms