RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 MTG2Q9H4K7 406 aa12.41□□□□□ -0.42
CLIC4-202ENST00000488683 MAGEE1Q9HCI5 957 aa12.41□□□□□ -0.42
CLIC4-202ENST00000488683 GPRC5BQ9NZH0 403 aa12.41□□□□□ -0.42
CLIC4-202ENST00000488683 OPTCQ9UBM4 332 aa12.41□□□□□ -0.42
CLIC4-202ENST00000488683 PHF24Q9UPV7 400 aa12.41□□□□□ -0.42
CLIC4-202ENST00000488683 PCDHB3Q9Y5E6 796 aa12.41□□□□□ -0.42
CLIC4-202ENST00000488683 DGKBQ9Y6T7 804 aa12.41□□□□□ -0.42
CLIC4-202ENST00000488683 ZNF106Q9H2Y7 1883 aaKnown RBP12.41□□□□□ -0.42
CLIC4-202ENST00000488683 PFDN1O60925 122 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 CST1P01037 141 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 PDYNP01213 254 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ALBP02768 609 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 BOP1Q14137 746 aaKnown RBP12.4□□□□□ -0.42
CLIC4-202ENST00000488683 SPIDRQ14159 915 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 MAPKAPK3Q16644 382 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 AASDHQ4L235 1098 aaPredicted RBP12.4□□□□□ -0.42
CLIC4-202ENST00000488683 INO80DQ53TQ3 878 aaPredicted RBP12.4□□□□□ -0.42
CLIC4-202ENST00000488683 USP51Q70EK9 711 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 SNX29P2Q8IUI4 249 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 AMBRA1Q9C0C7 1298 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 VNN3Q9NY84 501 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 TMCO1Q9UM00 188 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 PCDHB14Q9Y5E9 798 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 OBSL1O75147 1896 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ARNTLO00327 626 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 GNGT2O14610 69 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 RAD51BO15315 384 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 OTCP00480 354 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 JAK1P23458 1154 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 GSSP48637 474 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ADARB1P78563 741 aaKnown RBP12.4□□□□□ -0.42
CLIC4-202ENST00000488683 CYP4F3Q08477 520 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 CTU2Q2VPK5 515 aaKnown RBP12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ATP13A5Q4VNC0 1218 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ZNF551Q7Z340 670 aaPredicted RBP12.4□□□□□ -0.42
CLIC4-202ENST00000488683 PATL1Q86TB9 770 aaKnown RBP12.4□□□□□ -0.42
CLIC4-202ENST00000488683 EGFL6Q8IUX8 553 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ERI1Q8IV48 349 aaKnown RBP12.4□□□□□ -0.42
CLIC4-202ENST00000488683 TNIP2Q8NFZ5 429 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ZNF461Q8TAF7 563 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 FAM81AQ8TBF8 368 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ADAMTS16Q8TE57 1224 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 SLC22A17Q8WUG5 538 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 TANKQ92844 425 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 FAM162AQ96A26 154 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ULK4Q96C45 1275 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 RHBDF1Q96CC6 855 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 OR52E6Q96RD3 313 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 DPY30Q9C005 99 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 ING2Q9H160 280 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 PFDN4Q9NQP4 134 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
CLIC4-202ENST00000488683 PCDHB1Q9Y5F3 818 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 PCDHGA8Q9Y5G5 932 aa12.4□□□□□ -0.42
CLIC4-202ENST00000488683 GLYATL1P3A0A0U1RQE8 302 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ANXA6P08133 673 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CDH1P12830 882 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 EPORP19235 508 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ALDH4A1P30038 563 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 MLLT10P55197 1068 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 B4GALNT1Q00973 533 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 BCL2L1Q07817 233 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 PWP1Q13610 501 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 DDX39BQ13838 428 aaKnown RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CDKN3Q16667 212 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 R3HCC1LQ7Z5L2 792 aaKnown RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 PROSER1Q86XN7 944 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 RNF168Q8IYW5 571 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CMTM8Q8IZV2 173 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 DTNBP1Q96EV8 351 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 TSEN34Q9BSV6 310 aaKnown RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 MRPL9Q9BYD2 267 aaKnown RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ACPTQ9BZG2 426 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 IRAK4Q9NWZ3 460 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 MAGEL2Q9UJ55 1249 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 INTS6Q9UL03 887 aaKnown RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 FAF1Q9UNN5 650 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 OARD1Q9Y530 152 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 TNPO3Q9Y5L0 923 aaKnown RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 PLXNB3Q9ULL4 1909 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CHD9Q3L8U1 2897 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 XPNPEP2O43895 674 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 HS6ST1O60243 411 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 PRAMEF4O60810 478 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ULK1O75385 1050 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ZNF821O75541 412 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ABLIM3O94929 683 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 SERPINA1P01009 418 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 NPPAP01160 153 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 PGRP06401 933 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ZNF7P17097 686 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 GGT1P19440 569 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 LSM3P62310 102 aaKnown RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ESRRGP62508 458 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ZBED5Q49AG3 693 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 PRAMEF9Q5VWM5 478 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 SULT1C3Q6IMI6 304 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 LSRQ86X29 649 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ZBTB2Q8N680 514 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms