RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RBPMS2Q6ZRY4 209 aaKnown RBP3.02□□□□□ -1.93
CD46-215ENST00000488596 SLC26A9Q7LBE3 791 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 CFAP206Q8IYR0 622 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 DNAJC22Q8N4W6 341 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 PI4KAP1Q8N8J0 262 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 XXYLT1Q8NBI6 393 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 OR13J1Q8NGT2 312 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 FGFBP3Q8TAT2 258 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 ZNF473Q8WTR7 871 aaKnown RBP3.02□□□□□ -1.93
CD46-215ENST00000488596 SLAMF9Q96A28 289 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 SFXN2Q96NB2 322 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 ZNF558Q96NG5 402 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 BTBD10Q9BSF8 475 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 NAA11Q9BSU3 229 aaPredicted RBP3.02□□□□□ -1.93
CD46-215ENST00000488596 NUP85Q9BW27 656 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 VN1R1Q9GZP7 353 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 S1PR5Q9H228 398 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 TFB2MQ9H5Q4 396 aaKnown RBP3.02□□□□□ -1.93
CD46-215ENST00000488596 Q9N2K0 584 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 PIH1D3Q9NQM4 214 aaKnown RBP3.02□□□□□ -1.93
CD46-215ENST00000488596 OLFML3Q9NRN5 406 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 DPP3Q9NY33 737 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 KIAA1210Q9ULL0 1709 aa3.02□□□□□ -1.93
CD46-215ENST00000488596 FLT1P17948 1338 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 A0A1W2PRB8 838 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 PLOD2O00469 737 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 ACHEP22303 614 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 JAK1P23458 1154 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 MTHFRP42898 656 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 CCR10P46092 362 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 MAPK12P53778 367 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 LINC01547P58512 204 aaPredicted RBP3.01□□□□□ -1.93
CD46-215ENST00000488596 POLR2LP62875 67 aaKnown RBP3.01□□□□□ -1.93
CD46-215ENST00000488596 ACSM1Q08AH1 577 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 GAGE5Q13069 117 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 GAGE6Q13070 117 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 COG2Q14746 738 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 PTPRCAPQ14761 206 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 TNIP1Q15025 636 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 DCAF10Q5QP82 559 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 KRT39Q6A163 491 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 CHST3Q7LGC8 479 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 SMIM29Q86T20 159 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 NFE4Q86UQ8 179 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 TMEM139Q8IV31 216 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 GPALPP1Q8IXQ4 340 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 TTC30BQ8N4P2 665 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 LRRC8CQ8TDW0 803 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 IRGQQ8WZA9 623 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 SYN2Q92777 582 aaPredicted RBP3.01□□□□□ -1.93
CD46-215ENST00000488596 ZNF653Q96CK0 615 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 HDAC11Q96DB2 347 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 STAMBPL1Q96FJ0 436 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 ZNF354BQ96LW1 612 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 FER1L6-AS2Q96M78 137 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 MYADMQ96S97 322 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 SEPHS2Q99611 448 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 EPYCQ99645 322 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 RTP3Q9BQQ7 232 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 A4GALTQ9NPC4 353 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 SERINC1Q9NRX5 453 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 LRWD1Q9UFC0 647 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 IL17BQ9UHF5 180 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 MTUS1Q9ULD2 1270 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 GRIP1Q9Y3R0 1128 aa3.01□□□□□ -1.93
CD46-215ENST00000488596 PCDH11YQ9BZA8 1340 aa3□□□□□ -1.93
CD46-215ENST00000488596 A0A1W2PPQ1 181 aa3□□□□□ -1.93
CD46-215ENST00000488596 PRR32B1ATL7 298 aa3□□□□□ -1.93
CD46-215ENST00000488596 P2RY10O00398 339 aa3□□□□□ -1.93
CD46-215ENST00000488596 GAPDHSO14556 408 aaPredicted RBP3□□□□□ -1.93
CD46-215ENST00000488596 FGF17O60258 216 aa3□□□□□ -1.93
CD46-215ENST00000488596 PRKNO60260 465 aaPredicted RBP3□□□□□ -1.93
CD46-215ENST00000488596 ACSL3O95573 720 aa3□□□□□ -1.93
CD46-215ENST00000488596 HSPA4LO95757 839 aa3□□□□□ -1.93
CD46-215ENST00000488596 WDPCPO95876 746 aa3□□□□□ -1.93
CD46-215ENST00000488596 PENKP01210 267 aaPredicted RBP3□□□□□ -1.93
CD46-215ENST00000488596 FYNP06241 537 aa3□□□□□ -1.93
CD46-215ENST00000488596 CCDC175P0C221 793 aa3□□□□□ -1.93
CD46-215ENST00000488596 ERCC2P18074 760 aa3□□□□□ -1.93
CD46-215ENST00000488596 GNAZP19086 355 aa3□□□□□ -1.93
CD46-215ENST00000488596 DCTP40126 519 aa3□□□□□ -1.93
CD46-215ENST00000488596 ZNF41P51814 821 aaPredicted RBP3□□□□□ -1.93
CD46-215ENST00000488596 CX3CL1P78423 397 aa3□□□□□ -1.93
CD46-215ENST00000488596 DMP1Q13316 513 aaPredicted RBP3□□□□□ -1.93
CD46-215ENST00000488596 ACCSLQ4AC99 568 aa3□□□□□ -1.93
CD46-215ENST00000488596 WDR38Q5JTN6 314 aa3□□□□□ -1.93
CD46-215ENST00000488596 SPECC1Q5M775 1068 aa3□□□□□ -1.93
CD46-215ENST00000488596 CEP85LQ5SZL2 805 aa3□□□□□ -1.93
CD46-215ENST00000488596 STPG1Q5TH74 334 aa3□□□□□ -1.93
CD46-215ENST00000488596 MFSD12Q6NUT3 480 aa3□□□□□ -1.93
CD46-215ENST00000488596 NUP54Q7Z3B4 507 aa3□□□□□ -1.93
CD46-215ENST00000488596 ARHGAP22Q7Z5H3 698 aa3□□□□□ -1.93
CD46-215ENST00000488596 TICAM2Q86XR7 235 aa3□□□□□ -1.93
CD46-215ENST00000488596 PLD3Q8IV08 490 aa3□□□□□ -1.93
CD46-215ENST00000488596 ZNF843Q8N446 348 aa3□□□□□ -1.93
CD46-215ENST00000488596 ANKRD13CQ8N6S4 541 aa3□□□□□ -1.93
CD46-215ENST00000488596 TRIML1Q8N9V2 468 aa3□□□□□ -1.93
CD46-215ENST00000488596 CAMKVQ8NCB2 501 aa3□□□□□ -1.93
CD46-215ENST00000488596 OR2T12Q8NG77 320 aa3□□□□□ -1.93
CD46-215ENST00000488596 SSMEM1Q8WWF3 244 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms