RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 MORF4L1Q9UBU8 362 aa4.67□□□□□ -1.66
CDC42BPA-213ENST00000488131 PGAP2Q9UHJ9 254 aa4.67□□□□□ -1.66
CDC42BPA-213ENST00000488131 TBC1D24Q9ULP9 559 aa4.67□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF175Q9Y473 711 aa4.67□□□□□ -1.66
CDC42BPA-213ENST00000488131 PEX16Q9Y5Y5 336 aa4.67□□□□□ -1.66
CDC42BPA-213ENST00000488131 KCNE2Q9Y6J6 123 aa4.67□□□□□ -1.66
CDC42BPA-213ENST00000488131 SIP14410 1827 aa4.67□□□□□ -1.66
CDC42BPA-213ENST00000488131 ABCA3Q99758 1704 aa4.67□□□□□ -1.66
CDC42BPA-213ENST00000488131 A0A096LPK6 155 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TMEM82A0PJX8 343 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 MEIOCA2RUB1 952 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TYW5A2RUC4 315 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 WTIPA6NIX2 430 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 GOLGA8JA6NMD2 632 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 INO80B-WBP1J3KQ70 363 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 EEF2KO00418 725 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 UBDO15205 165 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 ARHGEF9O43307 516 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 SSX4O60224 188 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TBC1D4O60343 1298 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TPST1O60507 370 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 MSCO60682 206 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 RASGRP1O95267 797 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TRUB2O95900 331 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 PAHP00439 452 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 HLA-DRAP01903 254 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 C1QBP02746 253 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 FTH1P02794 183 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 IFNA16P05015 189 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 ALPPP05187 535 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CEACAM5P06731 702 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CYP2A6P11509 494 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 PSKH1P11801 424 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 COL6A1P12109 1028 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 LCP1P13796 627 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 PTX3P26022 381 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 GTF2E2P29084 291 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 FMO4P31512 558 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 SPRP35270 261 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 HMGCLP35914 325 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 SLC15A1P46059 708 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 NPTX2P47972 431 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 ATP5OP48047 213 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 ACOT2P49753 483 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 RGS7P49802 495 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 LIG4P49917 911 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 LIMK1P53667 647 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 GABREP78334 506 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 SLC35A2P78381 396 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TEKQ02763 1124 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF33BQ06732 778 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 GRM1Q13255 1194 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 NFE2L1Q14494 772 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CLCA4Q14CN2 919 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CA9Q16790 459 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CYP51A1Q16850 503 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 PLEKHG6Q3KR16 790 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 AGKQ53H12 422 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 PYCR3Q53H96 274 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 SPANXN3Q5MJ09 141 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 STYK1Q6J9G0 422 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CES5AQ6NT32 575 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TMEM270Q6UE05 265 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF782Q6ZMW2 699 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 USP53Q70EK8 1073 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CMC1Q7Z7K0 106 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 RBM23Q86U06 439 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CCDC190Q86UF4 302 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 LRRTM3Q86VH5 581 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 KIAA0319LQ8IZA0 1049 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 AMER2Q8N7J2 671 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 PLD5Q8N7P1 536 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 KCTD6Q8NC69 237 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 LINC00116Q8NCU8 138 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZMIZ2Q8NF64 920 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 AGR3Q8TD06 166 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 ARNTL2Q8WYA1 636 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CERS2Q96G23 380 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 PDXPQ96GD0 296 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 PDLIM5Q96HC4 596 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 OPALINQ96PE5 141 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CNPY3Q9BT09 278 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 GTPBP2Q9BX10 602 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 UGT2B28Q9BY64 529 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TRIM54Q9BYV2 358 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 NUAK2Q9H093 628 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TOR3AQ9H497 397 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 APOBEC3GQ9HC16 384 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CCNB1IP1Q9NPC3 277 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 FARSBQ9NSD9 589 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 GPATCH2Q9NW75 528 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 UCKL1Q9NWZ5 548 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 CMTM6Q9NX76 183 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 DIMT1Q9UNQ2 313 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 BTBD3Q9Y2F9 522 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 NDUFAF1Q9Y375 327 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 TNPO3Q9Y5L0 923 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 NPFFR2Q9Y5X5 522 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 BACE2Q9Y5Z0 518 aa4.66□□□□□ -1.66
CDC42BPA-213ENST00000488131 HSPE1-MOB4S4R3N1 261 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms