RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 FAM20CQ8IXL6 584 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 FAM71AQ8IYT1 594 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 SLC35F6Q8N357 371 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 CIARTQ8N365 385 aaPredicted RBP11.22□□□□□ -0.61
TRIM56-204ENST00000487252 HDAC10Q969S8 669 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 NAPGQ99747 312 aaPredicted RBP11.22□□□□□ -0.61
TRIM56-204ENST00000487252 GPATCH1Q9BRR8 931 aaKnown RBP11.22□□□□□ -0.61
TRIM56-204ENST00000487252 TRIM51Q9BSJ1 452 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.22□□□□□ -0.618e-15■□□□□ 9.4
TRIM56-204ENST00000487252 KIR3DX1Q9H7L2 352 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 NHEJ1Q9H9Q4 299 aaPredicted RBP11.22□□□□□ -0.61
TRIM56-204ENST00000487252 KCNJ16Q9NPI9 418 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRIM56-204ENST00000487252 ASB1Q9Y576 335 aa11.22□□□□□ -0.61
TRIM56-204ENST00000487252 V9GYY5 206 aaPredicted RBP11.22□□□□□ -0.61
TRIM56-204ENST00000487252 FAM170AA1A519 330 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 CTAGE9A4FU28 777 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 DFFAO00273 331 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 MATN2O00339 956 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 HCRTR1O43613 425 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 CRLF1O75462 422 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 OR2B3O76000 313 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 PRR35P0CG20 571 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 POLR2CP19387 275 aaPredicted RBP11.21□□□□□ -0.61
TRIM56-204ENST00000487252 FDXRP22570 491 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 PRDX3P30048 256 aaKnown RBP11.21□□□□□ -0.61
TRIM56-204ENST00000487252 CHRNB4P30926 498 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 MAXP61244 160 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 NKG7Q16617 165 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 WHAMMP3Q1A5X7 153 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 ASTE1Q2TB18 679 aaPredicted RBP11.21□□□□□ -0.61
TRIM56-204ENST00000487252 SHEQ5VZ18 495 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 NAPRTQ6XQN6 538 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 CHSY3Q70JA7 882 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 OVCH1Q7RTY7 1134 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 FGD2Q7Z6J4 655 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 CEP112Q8N8E3 955 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 MSANTD4Q8NCY6 345 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 NEK11Q8NG66 645 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 BRIX1Q8TDN6 353 aaKnown RBP11.21□□□□□ -0.61
TRIM56-204ENST00000487252 GLYATL1Q969I3 302 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 EID2BQ96D98 161 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 MESP1Q9BRJ9 268 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 SPRTNQ9H040 489 aaPredicted RBP11.21□□□□□ -0.61
TRIM56-204ENST00000487252 PTGFRNQ9P2B2 879 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 MKL2Q9ULH7 1088 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 RNF6Q9Y252 685 aa11.21□□□□□ -0.61
TRIM56-204ENST00000487252 ASPDHA6ND91 283 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 PJA2O43164 708 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 CDK14O94921 469 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 SIX3O95343 332 aaPredicted RBP11.2□□□□□ -0.62
TRIM56-204ENST00000487252 MLYCDO95822 493 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 TSPAN12O95859 305 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 F10P00742 488 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 PNMA6AP0CW24 399 aaPredicted RBP11.2□□□□□ -0.62
TRIM56-204ENST00000487252 VCLP18206 1134 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 EPHB1P54762 984 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 BPIFB4P59827 614 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 DCDC1P59894 354 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 SLC5A12Q1EHB4 618 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 ATG9BQ674R7 924 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 PDPK2PQ6A1A2 396 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 FAM83HQ6ZRV2 1179 aaPredicted RBP11.2□□□□□ -0.62
TRIM56-204ENST00000487252 KBTBD2Q8IY47 623 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 CLYBLQ8N0X4 340 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 TAB3Q8N5C8 712 aaPredicted RBP11.2□□□□□ -0.62
TRIM56-204ENST00000487252 CPA5Q8WXQ8 436 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 VPS50Q96JG6 964 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 CRACR2AQ9BSW2 395 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 ZSCAN5AQ9BUG6 496 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 TSGA10Q9BZW7 698 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 CHRNA10Q9GZZ6 450 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 GANQ9H2C0 597 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 FAM60AQ9NP50 221 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 SEPT11Q9NVA2 429 aaKnown RBP11.2□□□□□ -0.62
TRIM56-204ENST00000487252 PKD2L2Q9NZM6 624 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 NFKBIL1Q9UBC1 381 aaPredicted RBP11.2□□□□□ -0.62
TRIM56-204ENST00000487252 PSMD13Q9UNM6 376 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRIM56-204ENST00000487252 FHOD1Q9Y613 1164 aa11.2□□□□□ -0.62
TRIM56-204ENST00000487252 C1orf232A0A0U1RR37 186 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 A0A1W2PQ72 361 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 GSAPA4D1B5 854 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 OR5H15A6NDH6 313 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 RCCD1A6NED2 376 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 LRRC53A6NM62 1247 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 FAM90A27PA6NNH2 459 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 ZSCAN9O15535 394 aaPredicted RBP11.19□□□□□ -0.62
TRIM56-204ENST00000487252 ZNHIT1O43257 154 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 ASNA1O43681 348 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 MTX2O75431 263 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 CTSBP07858 339 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 MYBL2P10244 700 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 ABOP16442 354 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 MMP8P22894 467 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 DLX5P56178 289 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 OLIG2Q13516 323 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 CCDC122Q5T0U0 273 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 CCDC110Q8TBZ0 833 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms