RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PRAC2D3DTV9 90 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 PTGESO14684 152 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 BAG4O95429 457 aaKnown RBP3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 PENKP01210 267 aaPredicted RBP3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 IGHV4-39P01824 125 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 ATP5BP06576 529 aaKnown RBP3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 HOXA1P49639 335 aaPredicted RBP3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 ASCL1P50553 236 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF132P52740 706 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 DLX5P56178 289 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 RPS18P62269 152 aaKnown RBP3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 RBP5P82980 135 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 PPARDQ03181 441 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 EEF1A2Q05639 463 aaKnown RBP3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF273Q14593 569 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 KIR2DS3Q14952 304 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 PDSS1Q5T2R2 415 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 TRAT1Q6PIZ9 186 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 DCLRE1AQ6PJP8 1040 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 SUSD1Q6UWL2 747 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 PPP1R21Q6ZMI0 780 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 MEX3BQ6ZN04 569 aaKnown RBP3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 DSG4Q86SJ6 1040 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 SLC9B2Q86UD5 537 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 EXOC3L1Q86VI1 746 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 COMMD2Q86X83 199 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 METTL23Q86XA0 190 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 CRYBG2Q8N1P7 616 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 SETD6Q8TBK2 473 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 RNF128Q8TEB7 428 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 SPSB1Q96BD6 273 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 C17orf77Q96MU5 243 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 MUS81Q96NY9 551 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 VN1R1Q9GZP7 353 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 ZWILCHQ9H900 591 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 TCF7L2Q9NQB0 619 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 ABCF3Q9NUQ8 709 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 SLC38A7Q9NVC3 462 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 CPSF3Q9UKF6 684 aaKnown RBP3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 MMP24Q9Y5R2 645 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 TP53BP1Q12888 1972 aaPredicted RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 IGLV5-45A0A087WSX0 123 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 CLDN4O14493 209 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 WDR46O15213 610 aaKnown RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 CTSVO60911 334 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 RPN1P04843 607 aaKnown RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 HSP90AB1P08238 724 aaKnown RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 ACP2P11117 423 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 DGKAP23743 735 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 HOXC8P31273 242 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 SLC6A6P31641 620 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 FMO5P49326 533 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 TAF6P49848 677 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 THOP1P52888 689 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 MBTD1Q05BQ5 628 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 BFSP1Q12934 665 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 MFSD12Q6NUT3 480 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF449Q6P9G9 518 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 PET117Q6UWS5 81 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF852Q6ZMS4 543 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 TMPRSS11BQ86T26 416 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 CCAR2Q8N163 923 aaKnown RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 METTL27Q8N6F8 245 aaPredicted RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 POC1AQ8NBT0 407 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 SPATA20Q8TB22 786 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 DEPDC1BQ8WUY9 529 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 SSMEM1Q8WWF3 244 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 SYN2Q92777 582 aaPredicted RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 EXT2Q93063 718 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 FAM162AQ96A26 154 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 MOB3AQ96BX8 217 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 SGK494Q96LW2 274 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 RMDN2Q96LZ7 410 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 INPP4AQ96PE3 977 aaPredicted RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 FEVQ99581 238 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 MGME1Q9BQP7 344 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 APOBEC3GQ9HC16 384 aaKnown RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 SDF2L1Q9HCN8 221 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 MYNNQ9NPC7 610 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 OLFML3Q9NRN5 406 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 MRGBPQ9NV56 204 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 B3GAT1Q9P2W7 334 aa3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 NOL7Q9UMY1 257 aaKnown RBP3.31□□□□□ -1.88
SNRNP27-204ENST00000487029 SOS1Q07889 1333 aaPredicted RBP3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 A0A1W2PRB8 838 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 ARHGEF37A1IGU5 675 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 PRR23AA6NEV1 266 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 NEMP2A6NFY4 417 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 ANXA2P2A6NMY6 339 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 C16orf97H3BN30 126 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 GAPDHSO14556 408 aaPredicted RBP3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 CAPN9O14815 690 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 WDPCPO95876 746 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 IGHV2-70P01814 119 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 CYP11B2P19099 503 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 SP100P23497 879 aaPredicted RBP3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 MPZP25189 248 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 LHX1P48742 406 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 MAPK12P53778 367 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms