RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 H3BSA7 217 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 GRM6O15303 877 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 KRT6AP02538 564 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 KRT6BP04259 564 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 C8AP07357 584 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 C1SP09871 688 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 CTSAP10619 480 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 PFKLP17858 780 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 CDH2P19022 906 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 EPORP19235 508 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 AOAHP28039 575 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 CAPGP40121 348 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 KRT6CP48668 564 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 WDR5P61964 334 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 PLIN5Q00G26 463 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 GBX1Q14549 363 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 USP39Q53GS9 565 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 PYCR3Q53H96 274 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 CARD16Q5EG05 197 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 RFLNAQ6ZTI6 216 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 CCDC149Q6ZUS6 474 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 LRRC70Q7Z2Q7 622 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 ZNF786Q8N393 782 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 DHRSXQ8N5I4 330 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 ITFG1Q8TB96 612 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 CYGBQ8WWM9 190 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 CEP44Q9C0F1 390 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 ABCG8Q9H221 673 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 GORASP2Q9H8Y8 452 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 ACTR8Q9H981 624 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 SLC25A13Q9UJS0 675 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 PIKFYVEQ9Y2I7 2098 aa17.58■□□□□ 0.4
PDLIM7-207ENST00000486828 TRIM64A6NGJ6 449 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 CLOCKO15516 846 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 GMNNO75496 209 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 POP4O95707 220 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 PGRP06401 933 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 RAP2AP10114 183 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 CDH15P55291 814 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 CYP4F3Q08477 520 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 RBBP5Q15291 538 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 FAM98BQ52LJ0 330 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 SPANXN4Q5MJ08 99 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 LILRA6Q6PI73 481 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 SUSD1Q6UWL2 747 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 DPY19L3Q6ZPD9 716 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 UBE2R2Q712K3 238 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 ELMOD1Q8N336 334 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 TCAIMQ8N3R3 496 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 OR2T12Q8NG77 320 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 MAGEE2Q8TD90 523 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 FBXL20Q96IG2 436 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 SLC12A9Q9BXP2 914 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 TLR9Q9NR96 1032 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 FADS3Q9Y5Q0 445 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 A0A087WXM4 84 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 TRIM43BA6NCK2 446 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 NUAK1O60285 661 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 FGF18O76093 207 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 PRSS23O95084 383 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 UGT2B4P06133 528 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 C8GP07360 202 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 NFKBIAP25963 317 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 SPINT3P49223 89 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 GGTA1PQ4G0N0 100 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 CYBRD1Q53TN4 286 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 KRTCAP2Q8N6L1 136 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 LEMD2Q8NC56 503 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 TRIM43Q96BQ3 446 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 ACPTQ9BZG2 426 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 BRD9Q9H8M2 597 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 PARVBQ9HBI1 364 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 ZNHIT2Q9UHR6 403 aa17.57■□□□□ 0.4
PDLIM7-207ENST00000486828 A0A1W2PQ67 120 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 DEAF1O75398 565 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 MPC1LP0DKB6 136 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 CPSF6Q16630 551 aaKnown RBP eCLIP17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 ASTLQ6HA08 431 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 TBPL2Q6SJ96 375 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 PATL1Q86TB9 770 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 MSRB3Q8IXL7 192 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 ZNF548Q8NEK5 533 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 TMIGD2Q96BF3 282 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 MTFMTQ96DP5 389 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 YME1L1Q96TA2 773 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 SH3GL1Q99961 368 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 CORO1BQ9BR76 489 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 THUMPD3Q9BV44 507 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 EMILIN2Q9BXX0 1053 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 NTN4Q9HB63 628 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 ASAH2Q9NR71 780 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 SLC25A37Q9NYZ2 338 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 B4GALT6Q9UBX8 382 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 RSL24D1Q9UHA3 163 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 TMPRSS11EQ9UL52 423 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 AP3M1Q9Y2T2 418 aa17.56■□□□□ 0.4
PDLIM7-207ENST00000486828 UPK1AO00322 258 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 KIAA0355O15063 1070 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 GSTA4O15217 222 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms