RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ISCA2Q86U28 154 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 MYO1HQ8N1T3 1032 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 SDR16C5Q8N3Y7 309 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 BANPQ8N9N5 519 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 SKA2Q8WVK7 121 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-229ENST00000486665 ASB11Q8WXH4 323 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 ADAMTS14Q8WXS8 1223 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 TFGQ92734 400 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-229ENST00000486665 DLG3Q92796 817 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 PTERQ96BW5 349 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 C12orf66Q96MD2 445 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 C12orf65Q9H3J6 166 aaKnown RBP12.46□□□□□ -0.41
HDAC6-229ENST00000486665 TMEM216Q9P0N5 145 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 DOLKQ9UPQ8 538 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 TP53BP1Q12888 1972 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-229ENST00000486665 NPEPPSL1A6NEC2 478 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 B4DGG1 531 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 GFYI3L273 518 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 BTN3A1O00481 513 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 TRIM38O00635 465 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 YKT6O15498 198 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 NOBOXO60393 691 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 MYF5P13349 255 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 F3P13726 295 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 TFEBP19484 476 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 CRHR1P34998 444 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 ATP6V0D1P61421 351 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 SLC14A1Q13336 389 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 TSNQ15631 228 aaKnown RBP12.45□□□□□ -0.42
HDAC6-229ENST00000486665 FAM83EQ2M2I3 478 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 CCSMST1Q4G0I0 132 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 LVRNQ6Q4G3 990 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 NAGSQ8N159 534 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 OR5AR1Q8NGP9 310 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 MDM1Q8TC05 714 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 ATP6V1G3Q96LB4 118 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 FERD3LQ96RJ6 166 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 SMC6Q96SB8 1091 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 ACBD3Q9H3P7 528 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 ALG9Q9H6U8 611 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 NMRAL1Q9HBL8 299 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 TOR4AQ9NXH8 423 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 SIRPGQ9P1W8 387 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 DCDC2Q9UHG0 476 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 EMCNQ9ULC0 261 aa12.45□□□□□ -0.42
HDAC6-229ENST00000486665 GCN1Q92616 2671 aaKnown RBP12.45□□□□□ -0.42
HDAC6-229ENST00000486665 ACACAQ13085 2346 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 TDRD6O60522 2096 aaKnown RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 CABIN1Q9Y6J0 2220 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 KRT87PA6NCN2 255 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 NEMP2A6NFY4 417 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 ARHGEF33A8MVX0 844 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 IFRD1O00458 451 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 COPEO14579 308 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 TYROBPO43914 113 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 PCDHGA12O60330 932 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 PSIP1O75475 530 aaKnown RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 C1orf105O95561 183 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 GSTA1P08263 222 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 SBK3P0C264 359 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 TPBGLP0DKB5 382 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 MTHFD1P11586 935 aaKnown RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 HALP42357 657 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 BDKRB1P46663 353 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 MAZP56270 477 aaKnown RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 UBE2IP63279 158 aaKnown RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 PRKG2Q13237 762 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 MPP2Q14168 576 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 ACAP2Q15057 778 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 PHKG1Q16816 387 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 LRRC8EQ6NSJ5 796 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 SBSNQ6UWP8 590 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 UNC5DQ6UXZ4 953 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 UBE2R2Q712K3 238 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 C17orf82Q86X59 251 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 SFRP1Q8N474 314 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 ARL14Q8N4G2 192 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 TMEM151AQ8N4L1 468 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 EID2Q8N6I1 236 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 GOLGA6L1Q8N7Z2 621 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 BAHD1Q8TBE0 780 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 SLC37A2Q8TED4 501 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 KIAA1191Q96A73 305 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 NRTNQ99748 197 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 SLC12A9Q9BXP2 914 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 STMN4Q9H169 189 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 TFB2MQ9H5Q4 396 aaKnown RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 IMP3Q9NV31 184 aaKnown RBP12.44□□□□□ -0.42
HDAC6-229ENST00000486665 SENP1Q9P0U3 644 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 CIDEBQ9UHD4 219 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 PDE10AQ9Y233 779 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 ASF1AQ9Y294 204 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 BTBD3Q9Y2F9 522 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 ACTL7BQ9Y614 415 aa12.44□□□□□ -0.42
HDAC6-229ENST00000486665 OR5K4A6NMS3 321 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 SLC16A5O15375 505 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 GLRA3O75311 464 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 C8GP07360 202 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 ZNF883P0CG24 379 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms