RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 DGKQP52824 942 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 EPHB1P54762 984 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 GSCP56915 257 aaPredicted RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 DCDC1P59894 354 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 CAMK4Q16566 473 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 NKG7Q16617 165 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 EXOC3L4Q17RC7 722 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 KRTCAP3Q53RY4 240 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 ALS2CLQ60I27 953 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 GBP6Q6ZN66 633 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 FGD2Q7Z6J4 655 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 GPR135Q8IZ08 494 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 TRAM1L1Q8N609 369 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 BRIX1Q8TDN6 353 aaKnown RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 FKBP10Q96AY3 582 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 RMND5BQ96G75 393 aaPredicted RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 COX4I2Q96KJ9 171 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 SPATA32Q96LK8 384 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 NRTNQ99748 197 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 C11orf70Q9BRQ4 267 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 ZSCAN5AQ9BUG6 496 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 NUP85Q9BW27 656 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 SPATA16Q9BXB7 569 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 TDRD1Q9BXT4 1180 aaKnown RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 RNF32Q9H0A6 362 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 KLHL25Q9H0H3 589 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.92□□□□□ -1.14
XRN1-212ENST00000486211 TSPAN10Q9H1Z9 355 aaPredicted RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 WDR54Q9H977 334 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 MRM3Q9HC36 420 aaKnown RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 IMP3Q9NV31 184 aaKnown RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 COQ3Q9NZJ6 369 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 LRFN1Q9P244 771 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 PTGFRNQ9P2B2 879 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 NFKBIL1Q9UBC1 381 aaPredicted RBP7.92□□□□□ -1.14
XRN1-212ENST00000486211 PPT2Q9UMR5 302 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 AP4E1Q9UPM8 1137 aa7.92□□□□□ -1.14
XRN1-212ENST00000486211 HIVEP2P31629 2446 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 TLN2Q9Y4G6 2542 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ELOA3CA0A087WX78 387 aaPredicted RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 TCRBV5S1A1TA0A578 114 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 GSAPA4D1B5 854 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 GTPBP10A4D1E9 387 aaKnown RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 ELOA3DA6NLF2 546 aaPredicted RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 FAM90A27PA6NNH2 459 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ZSCAN9O15535 394 aaPredicted RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 KCNJ13O60928 360 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 USP1O94782 785 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 PRAMEF1O95521 474 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ONECUT2O95948 504 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 PRR35P0CG20 571 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 VCLP18206 1134 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ZNF143P52747 638 aaPredicted RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 RPL26P61254 145 aaKnown RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 KRT85P78386 507 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 TMPRSS15P98073 1019 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 DPYSQ14117 519 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 NFE2L1Q14494 772 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ZIC1Q15915 447 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 DEFB113Q30KQ7 82 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 DEFB110Q30KQ9 67 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ELOA3BQ3SY89 546 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ANKRD20A8PQ5CZ79 823 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 PDPK2PQ6A1A2 396 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ALG1LQ6GMV1 187 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 PAMR1Q6UXH9 720 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 COX15Q7KZN9 410 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 OVCH1Q7RTY7 1134 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 AMZ2Q86W34 360 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 TRAPPC5Q8IUR0 188 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 SIAH3Q8IW03 269 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 TEX26Q8N6G2 289 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 SIRT6Q8N6T7 355 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ZNF655Q8N720 491 aaPredicted RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 C3orf20Q8ND61 904 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 LPCAT1Q8NF37 534 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ELOA3Q8NG57 546 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 OR4E2Q8NGC2 313 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 SLC30A5Q8TAD4 765 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 NELFBQ8WX92 580 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 GPATCH1Q9BRR8 931 aaKnown RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 TRIM51Q9BSJ1 452 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 SLC26A1Q9H2B4 701 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 CLEC4MQ9H2X3 399 aaPredicted RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 ZFYVE1Q9HBF4 777 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ZNF160Q9HCG1 818 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 NT5MQ9NPB1 228 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 RASSF1Q9NS23 344 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 NOCTQ9UK39 431 aaKnown RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 RPL26L1Q9UNX3 145 aaKnown RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 MRPS2Q9Y399 296 aaKnown RBP7.91□□□□□ -1.14
XRN1-212ENST00000486211 L3MBTL1Q9Y468 752 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 ASB1Q9Y576 335 aa7.91□□□□□ -1.14
XRN1-212ENST00000486211 FAM237BA0A1B0GVD1 139 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 SIGLEC16A6NMB1 481 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 EIF3CLB5ME19 914 aaKnown RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 MATN2O00339 956 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 BTN3A3O00478 584 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 BTN3A1O00481 513 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 KLK8O60259 260 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms