RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	PIANP	Q8IYJ0	282 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	ACVR1C	Q8NER5	493 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	OR52E1	Q8NGJ3	308 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	LRRC45	Q96CN5	670 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	CDKN2AIPNL	Q96HQ2	116 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	MRFAP1L1	Q96HT8	127 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	FCRL4	Q96PJ5	515 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	DESI2	Q9BSY9	194 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	TMEM121	Q9BTD3	319 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	HGH1	Q9BTY7	390 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	CHST8	Q9H2A9	424 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	OR52A5	Q9H2C5	316 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	MLXIPL	Q9NP71	852 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	SMARCAL1	Q9NZC9	954 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	SLC5A6	Q9Y289	635 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	HEBP2	Q9Y5Z4	205 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	PRSS21	Q9Y6M0	314 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	CELSR1	Q9NYQ6	3014 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZFHX3	Q15911	3703 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	ADGRG4	Q8IZF6	3080 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	C17orf113	A0A1B0GUU1	675 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	ARHGAP10	A1A4S6	786 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	TMEM150C	B9EJG8	249 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	BTN3A1	O00481	513 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	ST6GAL1	P15907	406 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	ACRV1	P26436	265 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	PTPN4	P29074	926 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	IL10RA	Q13651	578 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	DBN1	Q16643	649 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	CCDC38	Q502W7	563 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	SLC6A19	Q695T7	634 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	UBL4B	Q8N7F7	174 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	OR1L3	Q8NH93	324 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	HEXDC	Q8WVB3	486 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	TFG	Q92734	400 aa	Predicted RBP	10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	CLIP3	Q96DZ5	547 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	MOCOS	Q96EN8	888 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	CALR3	Q96L12	384 aa	Known RBP	10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	PPP1R2P1	Q96PQ5	205 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	ALS2CR12	Q96Q35	445 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	BAG1	Q99933	345 aa	Predicted RBP	10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	GPR87	Q9BY21	358 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	ING2	Q9H160	280 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	LRRC40	Q9H9A6	602 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	C1GALT1	Q9NS00	363 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	NLE1	Q9NVX2	485 aa	Predicted RBP	10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	POMT2	Q9UKY4	750 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	BTRC	Q9Y297	605 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	NAV3	Q8IVL0	2385 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	PDZD2	O15018	2839 aa		10.25	□□□□□ -0.77
HMGN1-215	ENST00000485550	CCDC168	Q8NDH2	2452 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	IGLV3-16	A0A075B6K0	115 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	TRBV5-4	A0A0C4DH59	114 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	MEN1	O00255	615 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	DPM1	O60762	260 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	CBX6	O95503	412 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	KLK3	P07288	261 aa	Predicted RBP	10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	PTGIR	P43119	386 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	CACNG1	Q06432	222 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	KIF5A	Q12840	1032 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	ABR	Q12979	859 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	NAA30	Q147X3	362 aa	Predicted RBP	10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	UGT8	Q16880	541 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZNF658B	Q4V348	819 aa	Predicted RBP	10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	PLEKHS1	Q5SXH7	462 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	PAPD7	Q5XG87	772 aa	Known RBP	10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZNF449	Q6P9G9	518 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	PRUNE1	Q86TP1	453 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	TRIM73	Q86UV7	250 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	AMIGO1	Q86WK6	493 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	KLHDC8B	Q8IXV7	354 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	RBMXL3	Q8N7X1	1067 aa	Known RBP	10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	ENDOV	Q8N8Q3	282 aa	Known RBP	10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	OR52K1	Q8NGK4	314 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	OR8K5	Q8NH50	307 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	STYX	Q8WUJ0	223 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	ATG4A	Q8WYN0	398 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	CPT1B	Q92523	772 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	ELMO1	Q92556	727 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	TRAPPC9	Q96Q05	1148 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	UNK	Q9C0B0	810 aa	Known RBP	10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	SLC7A5P2	Q9GIP4	190 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	VPS37B	Q9H9H4	285 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	FANCE	Q9HB96	536 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZNF451	Q9Y4E5	1061 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	PCNX1	Q96RV3	2341 aa		10.24	□□□□□ -0.77
HMGN1-215	ENST00000485550	CCDC162P	A2VCL2	907 aa		10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550		A6NL46	340 aa		10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550	MIF4GD	A9UHW6	222 aa	Known RBP	10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550		H7C0S8	307 aa		10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZNF185	O15231	689 aa		10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550	AP2A1	O95782	977 aa		10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550	RECK	O95980	971 aa		10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550	IFNB1	P01574	187 aa		10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550	CYP2A7	P20853	494 aa		10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550	MSN	P26038	577 aa	Known RBP	10.23	□□□□□ -0.77
HMGN1-215	ENST00000485550	GRIA1	P42261	906 aa		10.23	□□□□□ -0.77

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