RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ZCCHC8Q6NZY4 707 aaKnown RBP17.11■□□□□ 0.33
CHMP3-207ENST00000485465 TTC23LQ6PF05 361 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 GPSM1Q86YR5 675 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 DCUN1D3Q8IWE4 304 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 ARL10Q8N8L6 244 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 AVL9Q8NBF6 648 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 MCOLN3Q8TDD5 553 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 ATOH8Q96SQ7 321 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
CHMP3-207ENST00000485465 TRIM54Q9BYV2 358 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 IQCGQ9H095 443 aaKnown RBP17.11■□□□□ 0.33
CHMP3-207ENST00000485465 MRPL46Q9H2W6 279 aaKnown RBP17.11■□□□□ 0.33
CHMP3-207ENST00000485465 RDH14Q9HBH5 336 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 KCNK9Q9NPC2 374 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 POT1Q9NUX5 634 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 POLG2Q9UHN1 485 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 EMCNQ9ULC0 261 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 RNF112Q9ULX5 631 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 PLLPQ9Y342 182 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 OARD1Q9Y530 152 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 ZFC3H1O60293 1989 aaKnown RBP17.11■□□□□ 0.33
CHMP3-207ENST00000485465 LAMA1P25391 3075 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 PRPF4O43172 522 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHMP3-207ENST00000485465 SIGLEC6O43699 453 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 HIST1H2AGP0C0S8 130 aaPredicted RBP17.1■□□□□ 0.33
CHMP3-207ENST00000485465 HIST1H2ADP20671 130 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 FASLGP48023 281 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 RPIAP49247 311 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 GPS2Q13227 327 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 CCDC153Q494R4 210 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 CCSMST1Q4G0I0 132 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 HSP90B2PQ58FF3 399 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 FRA10AC1Q70Z53 315 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 SLC35F3Q8IY50 421 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 TMEM151AQ8N4L1 468 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 FAM181AQ8N9Y4 354 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 TCP10LQ8TDR4 215 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 ZFPM2Q8WW38 1151 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 RAD51AP1Q96B01 352 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 HIST1H2AHQ96KK5 128 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 CAMK1GQ96NX5 476 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 HIST1H2AJQ99878 128 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 H2AFJQ9BTM1 129 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 HGH1Q9BTY7 390 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 C12orf65Q9H3J6 166 aaKnown RBP17.1■□□□□ 0.33
CHMP3-207ENST00000485465 SLC40A1Q9NP59 571 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 MED4Q9NPJ6 270 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 XPR1Q9UBH6 696 aa17.1■□□□□ 0.33
CHMP3-207ENST00000485465 TDRKHQ9Y2W6 561 aaKnown RBP17.1■□□□□ 0.33
CHMP3-207ENST00000485465 RALGAPA1Q6GYQ0 2036 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 FRYLO94915 3013 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 PABPN1LA6NDY0 278 aaKnown RBP17.09■□□□□ 0.33
CHMP3-207ENST00000485465 SYCE1LA8MT33 242 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 MYO1CO00159 1063 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 PLIN3O60664 434 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 PROCP04070 461 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 SBK3P0C264 359 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 RPA3P35244 121 aaPredicted RBP17.09■□□□□ 0.33
CHMP3-207ENST00000485465 GRK6P43250 576 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 AP1S2P56377 157 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 HHEXQ03014 270 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 GRB7Q14451 532 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 TGFBIQ15582 683 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 INAVAQ3KP66 663 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.09■□□□□ 0.33
CHMP3-207ENST00000485465 RBM12BQ8IXT5 1001 aaKnown RBP17.09■□□□□ 0.33
CHMP3-207ENST00000485465 OR9A1PQ8NGU1 263 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 APOLD1Q96LR9 279 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 PKP4Q99569 1192 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 STN1Q9H668 368 aaKnown RBP17.09■□□□□ 0.33
CHMP3-207ENST00000485465 KIR3DX1Q9H7L2 352 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 UTP6Q9NYH9 597 aaKnown RBP17.09■□□□□ 0.33
CHMP3-207ENST00000485465 CPSF2Q9P2I0 782 aaKnown RBP17.09■□□□□ 0.33
CHMP3-207ENST00000485465 SLC17A7Q9P2U7 560 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 CIDEBQ9UHD4 219 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 BTBD3Q9Y2F9 522 aa17.09■□□□□ 0.33
CHMP3-207ENST00000485465 KRT87PA6NCN2 255 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 C4orf47A7E2U8 309 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 TARM1B6A8C7 271 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 UBXN8O00124 270 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 TK2O00142 265 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 PPM1DO15297 605 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 FLRT2O43155 660 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 TPBGLP0DKB5 382 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 CD59P13987 128 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 CDKL1Q00532 357 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 BIRC2Q13490 618 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 MPP2Q14168 576 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 NR0B2Q15466 257 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 OR52E1Q8NGJ3 308 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 EXT2Q93063 718 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 SH3KBP1Q96B97 665 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 CCDC138Q96M89 665 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 ARL15Q9NXU5 204 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 NUDT4Q9NZJ9 180 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 NCKIPSDQ9NZQ3 722 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 PADI4Q9UM07 663 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 PLAGL1Q9UM63 463 aa17.08■□□□□ 0.32
CHMP3-207ENST00000485465 LY6G6EA0A0G2JKS1 128 aa17.07■□□□□ 0.32
CHMP3-207ENST00000485465 TMEM120BA0PK00 339 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms