RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 ALOX15P16050 662 aaPredicted RBP10.55□□□□□ -0.72
DDX56-212ENST00000485367 MAGEA6P43360 314 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 DYNLT1P63172 113 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 BASP1P80723 227 aaKnown RBP10.55□□□□□ -0.72
DDX56-212ENST00000485367 PPIDQ08752 370 aaKnown RBP10.55□□□□□ -0.72
DDX56-212ENST00000485367 TUBB3Q13509 450 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 COL28A1Q2UY09 1125 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 FAM182AQ5T1J6 154 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 LRRC66Q68CR7 880 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 SLC9A4Q6AI14 798 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 ALG1LQ6GMV1 187 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 RAET1GQ6H3X3 334 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 NPNTQ6UXI9 565 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 RNF111Q6ZNA4 994 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 RBM44Q6ZP01 1051 aaKnown RBP10.55□□□□□ -0.72
DDX56-212ENST00000485367 CDHR3Q6ZTQ4 885 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 CYS1Q717R9 158 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 ZNF554Q86TJ5 538 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 PLD5Q8N7P1 536 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 FAM46DQ8NEK8 389 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 LPCAT1Q8NF37 534 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 ADCY4Q8NFM4 1077 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 ARRDC2Q8TBH0 407 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 TRPC4APQ8TEL6 797 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 CCDC3Q9BQI4 270 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 TDRD1Q9BXT4 1180 aaKnown RBP10.55□□□□□ -0.72
DDX56-212ENST00000485367 TEX101Q9BY14 249 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 TMEM168Q9H0V1 697 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 PAK5Q9P286 719 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 PRPF19Q9UMS4 504 aaKnown RBP10.55□□□□□ -0.72
DDX56-212ENST00000485367 POMPQ9Y244 141 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 PPIL1Q9Y3C6 166 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 NBEAQ8NFP9 2946 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 A0A0J9YVX5 310 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 TCRBV7S3A2A0A539 114 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 PRSS38A1L453 326 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 ZNF487B1APH4 448 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CASC3O15234 703 aaKnown RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 TLX3O43711 291 aaPredicted RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 MPOP05164 745 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 GRK2P25098 689 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CD86P42081 329 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 GPR1P46091 355 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CD97P48960 835 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 NR1H2P55055 460 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 MTTPP55157 894 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 EIF3EP60228 445 aaKnown RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 APOFQ13790 326 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 PDK1Q15118 436 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CLPPQ16740 277 aaPredicted RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 ISXQ2M1V0 245 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 LPCAT4Q643R3 524 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 NCCRP1Q6ZVX7 275 aaPredicted RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 TECPR1Q7Z6L1 1165 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 IGDCC3Q8IVU1 814 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 PQLC1Q8N2U9 271 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 SLC25A41Q8N5S1 370 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CCL4L1Q8NHW4 92 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CCDC74AQ96AQ1 378 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 AP2M1Q96CW1 435 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 SERPINI1Q99574 410 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CEP41Q9BYV8 373 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 ABCG8Q9H221 673 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CARS2Q9HA77 564 aaKnown RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 SEPT10Q9P0V9 454 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CNOT11Q9UKZ1 510 aaKnown RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 ARHGEF17Q96PE2 2063 aaPredicted RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 KIF26BQ2KJY2 2108 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CAPN8A6NHC0 703 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 B4DGG1 531 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 H0YJX3 145 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 H3BNX3 289 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 TXNDC9O14530 226 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 PRLP01236 227 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CEACAM5P06731 702 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 GNPDA1P46926 289 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 POLD2P49005 469 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 ADARP55265 1226 aaKnown RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 GABREP78334 506 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 SLC25A3Q00325 362 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CDK3Q00526 305 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 PTSQ03393 145 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 ZBTB17Q13105 803 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 UBAP2LQ14157 1087 aaKnown RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 GRAMD1BQ3KR37 738 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 DOK6Q6PKX4 331 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 CNTD1Q8N815 330 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 PPM1NQ8N819 430 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 MCUQ8NE86 351 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 PPP1R14CQ8TAE6 165 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 PPP4R1Q8TF05 950 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 SNRNP27Q8WVK2 155 aaKnown RBP10.54□□□□□ -0.72
DDX56-212ENST00000485367 FGF11Q92914 225 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 SCAMP4Q969E2 229 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 RTP4Q96DX8 246 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 DCUN1D1Q96GG9 259 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 ATXN7L3BQ96GX2 97 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 HAUS8Q9BT25 410 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 MECRQ9BV79 373 aa10.54□□□□□ -0.72
DDX56-212ENST00000485367 DPEP2Q9H4A9 486 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms