RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 SP1P08047 785 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 SETSIPP0DME0 302 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 GLI4P10075 376 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 GAP43P17677 238 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 CCR1P32246 355 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 CASP2P42575 452 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 ACTG1P63261 375 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 DCDP81605 110 aaKnown RBP6.17□□□□□ -1.42
CHD6-209ENST00000482596 APBA1Q02410 837 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 TAF5Q15542 800 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 ACKR1Q16570 336 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 INO80DQ53TQ3 878 aaPredicted RBP6.17□□□□□ -1.42
CHD6-209ENST00000482596 FBXO42Q6P3S6 717 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 RFLNAQ6ZTI6 216 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 DPPA4Q7L190 304 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 HSD11B1LQ7Z5J1 315 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.17□□□□□ -1.42
CHD6-209ENST00000482596 KBTBD2Q8IY47 623 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 OTUD6BQ8N6M0 293 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 AVL9Q8NBF6 648 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 RELL2Q8NC24 303 aaPredicted RBP6.17□□□□□ -1.42
CHD6-209ENST00000482596 C8orf44Q96CB5 159 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 EEF2KMTQ96G04 330 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 CITED4Q96RK1 184 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 C17orf62Q9BQA9 187 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 TTYH2Q9BSA4 534 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 RBCK1Q9BYM8 510 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 OSGEPL1Q9H4B0 414 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 FAM204AQ9H8W3 233 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 FANCEQ9HB96 536 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 DDIT4Q9NX09 232 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 TAS2R14Q9NYV8 317 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 ROS1P08922 2347 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 NOTCH3Q9UM47 2321 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 EIF3CLB5ME19 914 aaKnown RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 SART1O43290 800 aaKnown RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 CDC40O60508 579 aaKnown RBP eCLIP6.16□□□□□ -1.42
CHD6-209ENST00000482596 ASMTLO95671 621 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 HPP00738 406 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 CTSBP07858 339 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 ATF4P18848 351 aaPredicted RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 IGFBP5P24593 272 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 EEF1DP29692 281 aaKnown RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 LONP1P36776 959 aaKnown RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 MASP1P48740 699 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 LMAN1P49257 510 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 KPNA2P52292 529 aaKnown RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 AP3M2P53677 418 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 TAP2Q03519 686 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 ZNF33BQ06732 778 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 ALCAMQ13740 583 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 CNGA3Q16281 694 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 RBBP7Q16576 425 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 NKAIN1Q4KMZ8 207 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 C1orf220Q5T0J3 134 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 FKBP15Q5T1M5 1219 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 VASNQ6EMK4 673 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 ABHD17CQ6PCB6 329 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 Q6ZVL8 140 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 NEK10Q6ZWH5 1172 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 GALNTL5Q7Z4T8 443 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 KRT77Q7Z794 578 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 PHLDB2Q86SQ0 1253 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 SLC13A5Q86YT5 568 aaPredicted RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 MDS2Q8NDY4 140 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 HCAR2Q8TDS4 363 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 RNASE6Q93091 150 aaKnown RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 UTP4Q969X6 686 aaKnown RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 KIAA1191Q96A73 305 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 PGAP3Q96FM1 320 aaPredicted RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 DTD2Q96FN9 168 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 ZNF396Q96N95 335 aaPredicted RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 EIF3CQ99613 913 aaKnown RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 NCAPGQ9BPX3 1015 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 SOX17Q9H6I2 414 aaPredicted RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 ANKRD10Q9NXR5 420 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 STOML1Q9UBI4 398 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 VTI1BQ9UEU0 232 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 CD84Q9UIB8 345 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 ING1Q9UK53 422 aaPredicted RBP6.16□□□□□ -1.42
CHD6-209ENST00000482596 PCDHGB1Q9Y5G3 927 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 FAM215AQ9Y5M1 114 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 ARHGAP21Q5T5U3 1957 aa6.16□□□□□ -1.42
CHD6-209ENST00000482596 TMEM89A2RUT3 159 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 GOSR1O95249 250 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 CALCAP01258 141 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 CD63P08962 238 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 SLC2A3P11169 496 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 ITGAMP11215 1152 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 ZNF24P17028 368 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 FSTP19883 344 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 ITGAXP20702 1163 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 FPR1P21462 350 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 GPR1P46091 355 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 ATP5J2P56134 94 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 RHOAP61586 193 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 PTPRRQ15256 657 aa6.15□□□□□ -1.42
CHD6-209ENST00000482596 TDRD12Q587J7 1177 aaKnown RBP6.15□□□□□ -1.42
CHD6-209ENST00000482596 CFAP58Q5T655 872 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms