RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TCEA3O75764 348 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 WISP3O95389 354 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 MATN4O95460 622 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 C1orf105O95561 183 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 GUCA1CO95843 209 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 CATP04040 527 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 RPN2P04844 631 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 MPOP05164 745 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 LTA4HP09960 611 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 CKMT1AP12532 417 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 NCF1P14598 390 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 CD1DP15813 335 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 GLB1P16278 677 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 CKMT2P17540 419 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 MAP4P27816 1152 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 FASLGP48023 281 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 NOVA1P51513 510 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 OR4D1Q15615 310 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 TSNQ15631 228 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 TRIP6Q15654 476 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 PHKG1Q16816 387 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 UNC5DQ6UXZ4 953 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 CYHR1Q6ZMK1 362 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 TMEM26Q6ZUK4 368 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 FRA10AC1Q70Z53 315 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 PIP4P1Q86T03 277 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 DCUN1D3Q8IWE4 304 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 TBC1D21Q8IYX1 336 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 IQCKQ8N0W5 287 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 PLD6Q8N2A8 252 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 OR4E2Q8NGC2 313 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 OR5K2Q8NHB8 316 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 BAHD1Q8TBE0 780 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 MZB1Q8WU39 189 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 AHCYL2Q96HN2 611 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 TSNARE1Q96NA8 513 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 ROPN1BQ9BZX4 212 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 SLC32A1Q9H598 525 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 ALG9Q9H6U8 611 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 MVB12BQ9H7P6 319 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 PPCSQ9HAB8 311 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 ROPN1Q9HAT0 212 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 SLC40A1Q9NP59 571 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 IGSF5Q9NSI5 407 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 EVA1BQ9NVM1 165 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 EURLQ9NYK6 297 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 KLHL42Q9P2K6 505 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 ADAMTS20P59510 1910 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 HEATR5BQ9P2D3 2071 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 SLC30A4O14863 429 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 TNFSF14O43557 240 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 NUDT21O43809 227 aaKnown RBP12.86□□□□□ -0.35
HDAC1-208ENST00000482310 PSIP1O75475 530 aaKnown RBP12.86□□□□□ -0.35
HDAC1-208ENST00000482310 TFEBP19484 476 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 CYP2A7P20853 494 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 MAGEA12P43365 314 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 ACADVLP49748 655 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 CLDN6P56747 220 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 CCL7P80098 99 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 LRRC8EQ6NSJ5 796 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 TTC23LQ6PF05 361 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 LRIG3Q6UXM1 1119 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 NEK10Q6ZWH5 1172 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 HDXQ7Z353 690 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 C17orf82Q86X59 251 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-208ENST00000482310 SRRM1Q8IYB3 904 aaKnown RBP12.86□□□□□ -0.35
HDAC1-208ENST00000482310 CENPLQ8N0S6 344 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-208ENST00000482310 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-208ENST00000482310 LCN9Q8WX39 176 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 DLG3Q92796 817 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 ALKBH8Q96BT7 664 aaKnown RBP12.86□□□□□ -0.35
HDAC1-208ENST00000482310 PTERQ96BW5 349 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 CDC6Q99741 560 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 DERL2Q9GZP9 239 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 KIR3DX1Q9H7L2 352 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 NCKIPSDQ9NZQ3 722 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 ATXN7L1Q9ULK2 861 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-208ENST00000482310 ICKQ9UPZ9 632 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 PDE10AQ9Y233 779 aa12.86□□□□□ -0.35
HDAC1-208ENST00000482310 DCDC2BA2VCK2 349 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 EME2A4GXA9 379 aaPredicted RBP12.85□□□□□ -0.35
HDAC1-208ENST00000482310 OR6C74A6NCV1 312 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 SUPT3HB4E1H0 165 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 EIF3FO00303 357 aaPredicted RBP12.85□□□□□ -0.35
HDAC1-208ENST00000482310 SPAG7O75391 227 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 SUPT3HO75486 399 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 KLHL2O95198 593 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 RPLP0P05388 317 aaKnown RBP12.85□□□□□ -0.35
HDAC1-208ENST00000482310 C8GP07360 202 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 AMD1P17707 334 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 MPSTP25325 297 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 NDUFS1P28331 727 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 PPP1CAP62136 330 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 SIM1P81133 766 aaPredicted RBP12.85□□□□□ -0.35
HDAC1-208ENST00000482310 C16orf46Q6P387 395 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 KLC3Q6P597 504 aa12.85□□□□□ -0.35
HDAC1-208ENST00000482310 USP53Q70EK8 1073 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms