RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 NCSTNQ92542 709 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 FAF2Q96CS3 445 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 HDAC11Q96DB2 347 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 WWC2-AS2Q96NR7 200 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 NAP1L5Q96NT1 182 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-216ENST00000481048 WDR24Q96S15 920 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 MENTQ9BUN1 341 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 MLPHQ9BV36 600 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-216ENST00000481048 RIOK2Q9BVS4 552 aaKnown RBP6.36□□□□□ -1.39
LRCH3-216ENST00000481048 NUP85Q9BW27 656 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 SUDS3Q9H7L9 328 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-216ENST00000481048 MAGEE1Q9HCI5 957 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 TRIM39Q9HCM9 518 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 OCIAD1Q9NX40 245 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 NFKBIL1Q9UBC1 381 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-216ENST00000481048 CD84Q9UIB8 345 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 CAPN11Q9UMQ6 739 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 CHKBQ9Y259 395 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 TMEM98Q9Y2Y6 226 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 LUC7L2Q9Y383 392 aaKnown RBP6.36□□□□□ -1.39
LRCH3-216ENST00000481048 TMEM184BQ9Y519 407 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-216ENST00000481048 CCDC88CQ9P219 2028 aa6.36□□□□□ -1.39
LRCH3-216ENST00000481048 HIVEP3Q5T1R4 2406 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 A0A087X0T9 212 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 C1orf232A0A0U1RR37 186 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 A6NCN8 305 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 CHUKO15111 745 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 POLR1CO15160 346 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 INPP4BO15327 924 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 GRID2O43424 1007 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 VEGFDO43915 354 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 MFSD11O43934 449 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 RAD1O60671 282 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 KCNJ13O60928 360 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 PROSCO94903 275 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 C9P02748 559 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 H2AFZP0C0S5 128 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 FAM228BP0C875 321 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 LIFP15018 202 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 WT1P19544 449 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 VAMP1P23763 118 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 HNRNPH3P31942 346 aaKnown RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 CSF2RBP32927 897 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 PBX1P40424 430 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 SSR1P43307 286 aaKnown RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 SELENOPP49908 381 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 POLE2P56282 527 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 UBASH3AP57075 661 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 DCDC1P59894 354 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 DSC2Q02487 901 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 IL11RAQ14626 422 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 CLCA4Q14CN2 919 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 IQCB1Q15051 598 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 C6orf15Q6UXA7 325 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 WASH2PQ6VEQ5 465 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 RFLNAQ6ZTI6 216 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 H2AFVQ71UI9 128 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 MARK2Q7KZI7 788 aaKnown RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 PHYKPLQ8IUZ5 450 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 CCDC13Q8IYE1 715 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 ESX1Q8N693 406 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 CCNYQ8ND76 341 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 ZNF564Q8TBZ8 553 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 DTX3LQ8TDB6 740 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 APOBEC4Q8WW27 367 aaKnown RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 CCDC140Q96MF4 163 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 ZNF830Q96NB3 372 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 ZSCAN5AQ9BUG6 496 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 RAB33BQ9H082 229 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 BRD8Q9H0E9 1235 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 GPN2Q9H9Y4 310 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-216ENST00000481048 WASH6PQ9NQA3 447 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 MYOTQ9UBF9 498 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 CPNE7Q9UBL6 633 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 TBC1D29Q9UFV1 150 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 PLEKHM1Q9Y4G2 1056 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 TENM4Q6N022 2769 aa6.35□□□□□ -1.39
LRCH3-216ENST00000481048 MN1Q10571 1320 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 A0A0U1RQS6 177 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 AGRPO00253 132 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 KMOO15229 486 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 STK17BO94768 372 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 MTA2O94776 668 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 SLC25A14O95258 325 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 VIPP01282 170 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 ATP1A1P05023 1023 aaKnown RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 HLA-DQB2P05538 268 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 CD48P09326 243 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 ACP5P13686 325 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 ZFXP17010 805 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 TCN2P20062 427 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 KDELR1P24390 212 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 CASRP41180 1078 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 ARHGAP25P42331 645 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 PPM1FP49593 454 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 UBE2IP63279 158 aaKnown RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 CYP4F2P78329 520 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 IFI35P80217 286 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 PPIDQ08752 370 aaKnown RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 NIPAL4Q0D2K0 466 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms