RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 ELP6Q0PNE2 266 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 MAD2L1BPQ15013 274 aaPredicted RBP14.04□□□□□ -0.16
NR1H3-220ENST00000481020 KIAA1614Q5VZ46 1190 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 OR2T5Q6IEZ7 315 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 MRPL10Q7Z7H8 261 aaKnown RBP14.04□□□□□ -0.16
NR1H3-220ENST00000481020 SPATA2LQ8IUW3 424 aaPredicted RBP14.04□□□□□ -0.16
NR1H3-220ENST00000481020 ZNF540Q8NDQ6 660 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 OR2T29Q8NH02 315 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 SCAMP5Q8TAC9 235 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 CNIH3Q8TBE1 160 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 CD200R1Q8TD46 325 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 PROX1Q92786 737 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 NCLNQ969V3 563 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 FAM120BQ96EK7 910 aaKnown RBP14.04□□□□□ -0.16
NR1H3-220ENST00000481020 LINGO1Q96FE5 620 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 ZNF486Q96H40 463 aaPredicted RBP14.04□□□□□ -0.16
NR1H3-220ENST00000481020 C19orf43Q9BQ61 176 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 MGME1Q9BQP7 344 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 CPPED1Q9BRF8 314 aaPredicted RBP14.04□□□□□ -0.16
NR1H3-220ENST00000481020 DCSTAMPQ9H295 470 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 IL1RAPQ9NPH3 570 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 RPS6KA6Q9UK32 745 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 PEX16Q9Y5Y5 336 aa14.04□□□□□ -0.16
NR1H3-220ENST00000481020 TBKBP1A7MCY6 615 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 XPNPEP2O43895 674 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 GLUD1P00367 558 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 APOA1P02647 267 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 FTH1P02794 183 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 MT-ND2P03891 347 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 CD36P16671 472 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 HOXC8P31273 242 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 S100A5P33763 92 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 TGFBR2P37173 567 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 GNPDA1P46926 289 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 PIK3CGP48736 1102 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 MASP1P48740 699 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 PXNP49023 591 aaPredicted RBP14.03□□□□□ -0.16
NR1H3-220ENST00000481020 CLK1P49759 484 aaKnown RBP14.03□□□□□ -0.16
NR1H3-220ENST00000481020 PSEN2P49810 448 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 HK3P52790 923 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 DGKQP52824 942 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 OLR1P78380 273 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 GTF2H2Q13888 395 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 TRIP4Q15650 581 aaPredicted RBP14.03□□□□□ -0.16
NR1H3-220ENST00000481020 GPR162Q16538 588 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 FAM174BQ3ZCQ3 159 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 RFTN2Q52LD8 501 aaPredicted RBP14.03□□□□□ -0.16
NR1H3-220ENST00000481020 VARS2Q5ST30 1063 aaKnown RBP14.03□□□□□ -0.16
NR1H3-220ENST00000481020 GTF2H2CQ6P1K8 395 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 ERICH5Q6P6B1 374 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 GOLGA7Q7Z5G4 137 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 ZDHHC21Q8IVQ6 265 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 C3orf58Q8NDZ4 430 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 OR52B6Q8NGF0 335 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 PSMA8Q8TAA3 256 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 FRS2Q8WU20 508 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 ITCHQ96J02 903 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 SNX18Q96RF0 628 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 GAD1Q99259 594 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 TINF2Q9BSI4 451 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 SLC29A3Q9BZD2 475 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 PDFQ9HBH1 243 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 SACM1LQ9NTJ5 587 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 TRPS1Q9UHF7 1281 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 NUDT5Q9UKK9 219 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 PKP3Q9Y446 797 aa14.03□□□□□ -0.16
NR1H3-220ENST00000481020 LOC110117498-PIK3R3F6TDL0 507 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 M0QZ92 97 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 OR7A17O14581 309 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 ENPP3O14638 875 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 HAT1O14929 419 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 FAM20BO75063 409 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 MED26O95402 600 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 SERPINA1P01009 418 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 SLC2A4P14672 509 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 LPOP22079 712 aaPredicted RBP14.02□□□□□ -0.16
NR1H3-220ENST00000481020 NR4A1P22736 598 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 SOX11P35716 441 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 NCS1P62166 190 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 LRIT3Q3SXY7 679 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 FAM219BQ5XKK7 198 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 SCIMPQ6UWF3 145 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 MILR1Q7Z6M3 343 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 TMEM179BQ7Z7N9 219 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 DSG4Q86SJ6 1040 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 SERPINA11Q86U17 422 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 MSRB3Q8IXL7 192 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 PAF1Q8N7H5 531 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 TTC29Q8NA56 475 aaPredicted RBP14.02□□□□□ -0.16
NR1H3-220ENST00000481020 OR4F6Q8NGB9 312 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 UBTD2Q8WUN7 234 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 PIK3R3Q92569 461 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 MYDGFQ969H8 173 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 FUBP3Q96I24 572 aaKnown RBP eCLIP14.02□□□□□ -0.16
NR1H3-220ENST00000481020 CCDC32Q9BV29 185 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 SLC25A37Q9NYZ2 338 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 OPTCQ9UBM4 332 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 DHRS7Q9Y394 339 aa14.02□□□□□ -0.16
NR1H3-220ENST00000481020 C17orf102A2RUQ5 167 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms