RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LARSQ9P2J5 1176 aaKnown RBP3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 GAGE2DQ9UEU5 116 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 IL17BQ9UHF5 180 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 OSGIN1Q9UJX0 560 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 FBXL2Q9UKC9 423 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 PADI3Q9ULW8 664 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 LOXL2Q9Y4K0 774 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 PCDH11XQ9BZA7 1347 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 PCDH11YQ9BZA8 1340 aa3.92□□□□□ -1.78
CDC42BPA-212ENST00000478573 KDRP35968 1356 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 hDV102S1A0JD36 115 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 NDUFS4O43181 175 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 PLPP2O43688 288 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 ZNF217O75362 1048 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 CREG1O75629 220 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 KCNK5O95279 499 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 QDPRP09417 244 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 DAOP14920 347 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 KCNA5P22460 613 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 HRH2P25021 359 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 AMPHP49418 695 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 CCR3P51677 355 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 IRX6P78412 446 aaPredicted RBP3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 ROR1Q01973 937 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 SNTA1Q13424 505 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 CBWD6Q4V339 395 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 KRTCAP3Q53RY4 240 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 CBWD3Q5JTY5 395 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 KCNT1Q5JUK3 1230 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 ARMC3Q5W041 872 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 WDR73Q6P4I2 378 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 RBPMS2Q6ZRY4 209 aaKnown RBP3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 ZNF534Q76KX8 674 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 CCDC186Q7Z3E2 898 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 DEFB132Q7Z7B7 95 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 PM20D2Q8IYS1 436 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 RFLNBQ8N5W9 214 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 EMC1Q8N766 993 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 TC2NQ8N9U0 490 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 XXYLT1Q8NBI6 393 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 SPATA20Q8TB22 786 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 PTERQ96BW5 349 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 HES6Q96HZ4 224 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 NEK1Q96PY6 1258 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 PKP4Q99569 1192 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 HGH1Q9BTY7 390 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 RAD21L1Q9H4I0 556 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 SDF2L1Q9HCN8 221 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 SH3GLB2Q9NR46 395 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 WDR35Q9P2L0 1181 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 TSPYL4Q9UJ04 414 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 NOTCH3Q9UM47 2321 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 LAMB2P55268 1798 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 N4BP2Q86UW6 1770 aaPredicted RBP3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 KIF7Q2M1P5 1343 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 IGSF1Q8N6C5 1336 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 NUP98P52948 1817 aa3.91□□□□□ -1.78
CDC42BPA-212ENST00000478573 SBF1O95248 1867 aa3.9□□□□□ -1.78
CDC42BPA-212ENST00000478573 ANKRD31Q8N7Z5 1873 aa3.9□□□□□ -1.78
CDC42BPA-212ENST00000478573 SAA2-SAA4A0A096LPE2 208 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 A0A1W2PP11 408 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 PRR23AA6NEV1 266 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 CLGNO14967 610 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 GGPS1O95749 300 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 AFPP02771 609 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 SP1P08047 785 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 CPT2P23786 658 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 HMGB2P26583 209 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 SSTR2P30874 369 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 ZNF41P51814 821 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 CTSCP53634 463 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 CLDN20P56880 219 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 DHX34Q14147 1143 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 MEP1AQ16819 746 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 MRGPRG-AS1Q2M3A8 158 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 FAM98BQ52LJ0 330 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 SETMARQ53H47 684 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 RAB6CQ53S08 254 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 ZDHHC20Q5W0Z9 365 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 RGMBQ6NW40 437 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 CCNI2Q6ZMN8 369 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 CHST3Q7LGC8 479 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 SLFN11Q7Z7L1 901 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 GALNT13Q8IUC8 556 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 ACVR1CQ8NER5 493 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 OR5R1Q8NH85 324 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 TAS1R2Q8TE23 839 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 RMDN1Q96DB5 314 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 QRFPRQ96P65 431 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 SMC6Q96SB8 1091 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 CMKLR1Q99788 373 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 SEMA3CQ99985 751 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 GPR88Q9GZN0 384 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 RAB6CQ9H0N0 254 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 ANKZF1Q9H8Y5 726 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 TAS2R14Q9NYV8 317 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 RCC2Q9P258 522 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 PCDHGA5Q9Y5G8 931 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 KCPQ6ZWJ8 1503 aa3.9□□□□□ -1.79
CDC42BPA-212ENST00000478573 TIAM2Q8IVF5 1701 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms