RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 PRAMEF17Q5VTA0 474 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 LYPLAL1Q5VWZ2 237 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 TRIM73Q86UV7 250 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 DENND6AQ8IWF6 608 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 FAM20CQ8IXL6 584 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 ZBED8Q8IZ13 594 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 ADGRF3Q8IZF5 1079 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 OTUD6BQ8N6M0 293 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 ACVR1CQ8NER5 493 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 AENQ8WTP8 325 aaKnown RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 LCN9Q8WX39 176 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 LPGAT1Q92604 370 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 ZDHHC12Q96GR4 267 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 CCNL2Q96S94 520 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 NAT9Q9BTE0 207 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 VPS37BQ9H9H4 285 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 FBXO8Q9NRD0 319 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 SPHK1Q9NYA1 384 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 SAMD15Q9P1V8 674 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 SEMA5BQ9P283 1151 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 CRYL1Q9Y2S2 319 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 CACNA1GO43497 2377 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 UBA6A0AVT1 1052 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 KLHL33A6NCF5 533 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 STMND1H3BQB6 276 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 K7ENP7 123 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 PRMT5O14744 637 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 NIPSNAP2O75323 286 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 GPC4O75487 556 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 FAM153BP0C7A2 387 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 SPTBP11277 2137 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 NELFEP18615 380 aaKnown RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 AOAHP28039 575 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 PEBP1P30086 187 aaKnown RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 FMO4P31512 558 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 VAC14Q08AM6 782 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 ABRQ12979 859 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 RPA4Q13156 261 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 GPR19Q15760 415 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 FAM153CQ494X1 144 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 CCSMST1Q4G0I0 132 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 SYTL3Q4VX76 610 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 KIAA0930Q6ICG6 404 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 INO80CQ6PI98 192 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 PYROXD1Q8WU10 500 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 CAVIN3Q969G5 261 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 SLC41A2Q96JW4 573 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 SLC30A3Q99726 388 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 AKIRIN1Q9H9L7 192 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 SLC17A6Q9P2U8 582 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 ASF1AQ9Y294 204 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 TDRKHQ9Y2W6 561 aaKnown RBP17.13■□□□□ 0.33
PTPN7-209ENST00000477554 NFS1Q9Y697 457 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 TEX264Q9Y6I9 313 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 COLEC10Q9Y6Z7 277 aa17.13■□□□□ 0.33
PTPN7-209ENST00000477554 BOD1L1Q8NFC6 3051 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 LOC101059948A0A1B0GTJ6 334 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 GSAPA4D1B5 854 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 IFRD1O00458 451 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-209ENST00000477554 POLR1CO15160 346 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-209ENST00000477554 HCRTR1O43613 425 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 STK17BO94768 372 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 CTSBP07858 339 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 LIFP15018 202 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 F8A1P23610 371 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 MAGEA4P43358 317 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 CD151P48509 253 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 CTBP1Q13363 440 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 GRB7Q14451 532 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 TYSND1Q2T9J0 566 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 TMEM164Q5U3C3 297 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 BROXQ5VW32 411 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 CCDC81Q6ZN84 652 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 GPR155Q7Z3F1 870 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 TMEM135Q86UB9 458 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 OOSP2Q86WS3 158 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 SLC22A15Q8IZD6 547 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 C2orf73Q8N5S3 287 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-209ENST00000477554 CFAP61Q8NHU2 1237 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 FLVCR1-AS1Q8TAF5 88 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 IL17FQ96PD4 163 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 EBNA1BP2Q99848 306 aaKnown RBP17.12■□□□□ 0.33
PTPN7-209ENST00000477554 SRMSQ9H3Y6 488 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 POMT2Q9UKY4 750 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 MED16Q9Y2X0 877 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 MAD1L1Q9Y6D9 718 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 RPS6KL1Q9Y6S9 549 aa17.12■□□□□ 0.33
PTPN7-209ENST00000477554 ATRXP46100 2492 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 FAM237BA0A1B0GVD1 139 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 SLC9B1P1A6NJY1 282 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 RAD1O60671 282 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 NDUFS3O75489 264 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 TTC4O95801 387 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 DLGAP3O95886 979 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 ST6GAL1P15907 406 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 ELK3P41970 407 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 TTPAP49638 278 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 MPP1Q00013 466 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 PTRHD1Q6GMV3 140 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms