RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 C19orf47Q8N9M1 422 aaKnown RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 ANKRD20A12PQ8NF67 263 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 ZFPM2Q8WW38 1151 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 PTERQ96BW5 349 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 CCDC120Q96HB5 630 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 CALR3Q96L12 384 aaKnown RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 LINC00615Q96LM1 132 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 SPSB2Q99619 263 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 DPH2Q9BQC3 489 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 PLA2G3Q9NZ20 509 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 IFT80Q9P2H3 777 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-204ENST00000477429 ACSL5Q9ULC5 683 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 PLAGL1Q9UM63 463 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 HYOU1Q9Y4L1 999 aa9.4□□□□□ -0.9
COL4A5-204ENST00000477429 SNRNP200O75643 2136 aaKnown RBP9.4□□□□□ -0.91
COL4A5-204ENST00000477429 NUP210LQ5VU65 1888 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 A0A1B0GTH6 734 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 PCDH17O14917 1159 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 F10P00742 488 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 CELA2AP08217 269 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 DRD2P14416 443 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 MCM3P25205 808 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 HTR1EP28566 365 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 KIR3DL1P43629 444 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 PRLHRP49683 370 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 ADORA2A-AS1P86434 159 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 ART3Q13508 389 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 BOP1Q14137 746 aaKnown RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 NAA30Q147X3 362 aaPredicted RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 CYP2A13Q16696 494 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 ALKBH5Q6P6C2 394 aaKnown RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 NAPRTQ6XQN6 538 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 UNC5AQ6ZN44 842 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 GLT6D1Q7Z4J2 308 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 AMIGO1Q86WK6 493 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 ZNF567Q8N184 647 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 IPMKQ8NFU5 416 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 OR4K2Q8NGD2 314 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 OR5AR1Q8NGP9 310 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 OR13C4Q8NGS5 318 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 SPATA3Q8NHX4 192 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 HM13Q8TCT9 377 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 RBM41Q96IZ5 413 aaKnown RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 IP6K3Q96PC2 410 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 APOL2Q9BQE5 337 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 TRIM56Q9BRZ2 755 aaKnown RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 XPO4Q9C0E2 1151 aaKnown RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 SLC7A5P2Q9GIP4 190 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 TFB2MQ9H5Q4 396 aaKnown RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 SOX17Q9H6I2 414 aaPredicted RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 COG4Q9H9E3 785 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 SYTL2Q9HCH5 934 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 ANO10Q9NW15 660 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 TMEM63CQ9P1W3 806 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 CTSFQ9UBX1 484 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 FAM153AQ9UHL3 310 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 PADI2Q9Y2J8 665 aa9.39□□□□□ -0.91
COL4A5-204ENST00000477429 MAP1AP78559 2803 aaPredicted RBP9.39□□□□□ -0.91
COL4A5-204ENST00000477429 AGAP14A8MT82 685 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 C2orf74A8MZ97 194 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 APOL1O14791 398 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 ZSCAN9O15535 394 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 ZNHIT1O43257 154 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 PRICKLE3O43900 615 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 SRP72O76094 671 aaKnown RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 IPO13O94829 963 aaKnown RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 NUDT7P0C024 238 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 MMP11P24347 488 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 NDUFS1P28331 727 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 PBX1P40424 430 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 PER3P56645 1201 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 AIMP2Q13155 320 aaKnown RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 KRT33BQ14525 404 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 NR1I3Q14994 352 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 NFKBIBQ15653 356 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 NKG7Q16617 165 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 STX1AQ16623 288 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 LONRF2Q1L5Z9 754 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 ZNF630Q2M218 657 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 MFSD7Q6UXD7 560 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 MRGPRGQ86SM5 289 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 MAP7D3Q8IWC1 876 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 SHISA5Q8N114 240 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 CLDN19Q8N6F1 224 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 METTL27Q8N6F8 245 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 OR11G2Q8NGC1 345 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 OR1N1Q8NGS0 311 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 PSMF1Q92530 271 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 TM9SF4Q92544 642 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 THOC3Q96J01 351 aaKnown RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 ZCCHC2Q9C0B9 1178 aaKnown RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 TRABDQ9H4I3 376 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 ASB8Q9H765 288 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 OLAHQ9NV23 265 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 HAUS2Q9NVX0 235 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 CTTNBP2NLQ9P2B4 639 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 STOX2Q9P2F5 926 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-204ENST00000477429 NDOR1Q9UHB4 597 aa9.38□□□□□ -0.91
COL4A5-204ENST00000477429 CIDEBQ9UHD4 219 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms