RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	STK26	Q9P289	416 aa		3.91	□□□□□ -1.78
RBM39-231	ENST00000477334	MTUS1	Q9ULD2	1270 aa		3.91	□□□□□ -1.78
RBM39-231	ENST00000477334	PADI2	Q9Y2J8	665 aa		3.91	□□□□□ -1.78
RBM39-231	ENST00000477334		A0A1W2PPM1	405 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	PMS2P5	A8MQ11	134 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	FAM72C	H0Y354	149 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	DNM1L	O00429	736 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	LINC01565	O15544	149 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	GGPS1	O95749	300 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	WDPCP	O95876	746 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	SMIM18	P0DKX4	95 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	LIF	P15018	202 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	PDX1	P52945	283 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	LGALS3BP	Q08380	585 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	KYNU	Q16719	465 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	CRY2	Q49AN0	593 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	DCAF10	Q5QP82	559 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	FAM72A	Q5TYM5	149 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	KRTAP5-1	Q6L8H4	278 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	FAM72D	Q6L9T8	149 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	TMPRSS11B	Q86T26	416 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	FAM72B	Q86X60	149 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	TDRD5	Q8NAT2	981 aa	Known RBP	3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	SLC4A11	Q8NBS3	891 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	IRGQ	Q8WZA9	623 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	HSD17B8	Q92506	261 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	TMEM143	Q96AN5	459 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	NSL1	Q96IY1	281 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334		Q9N2K0	584 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	SERINC1	Q9NRX5	453 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	ADPRHL2	Q9NX46	363 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	C5AR2	Q9P296	337 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	ZNF624	Q9P2J8	865 aa	Predicted RBP	3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	IL17B	Q9UHF5	180 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	NRBP1	Q9UHY1	535 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	RNF150	Q9ULK6	438 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	NME7	Q9Y5B8	376 aa		3.9	□□□□□ -1.79
RBM39-231	ENST00000477334	PRR23A	A6NEV1	266 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	TRIM77	I1YAP6	450 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	SLC22A2	O15244	555 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	SLCO2B1	O94956	709 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	INHBA	P08476	426 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	ANOS1	P23352	680 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	MPZ	P25189	248 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	SLC6A6	P31641	620 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	PCGF2	P35227	344 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	MTHFR	P42898	656 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	ZNF628	Q5EBL2	1059 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	KRTAP5-4	Q6L8H1	288 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	FAM198B	Q6UWH4	519 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	ARHGAP22	Q7Z5H3	698 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	CENPV	Q7Z7K6	275 aa	Predicted RBP	3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	ISCA2	Q86U28	154 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	TMEM139	Q8IV31	216 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	ZNF383	Q8NA42	475 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	GRAPL	Q8TC17	118 aa	Predicted RBP	3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	GRHL3	Q8TE85	626 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	SSMEM1	Q8WWF3	244 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	SYN2	Q92777	582 aa	Predicted RBP	3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	CNDP2	Q96KP4	475 aa	Known RBP	3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	ANKRD2	Q9GZV1	360 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	MYNN	Q9NPC7	610 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	SLC52A3	Q9NQ40	469 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	PIH1D3	Q9NQM4	214 aa	Known RBP	3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	TXLNG	Q9NUQ3	528 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	LRWD1	Q9UFC0	647 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	TCF19	Q9Y242	345 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	RIPK3	Q9Y572	518 aa		3.89	□□□□□ -1.79
RBM39-231	ENST00000477334	IGLV9-49	A0A0B4J1Y8	123 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334		A0A0G2JLW4	131 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	TBX10	O75333	385 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	CELF2	O95319	508 aa	Known RBP	3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	PIGN	O95427	931 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	AMBP	P02760	352 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	RAB40AL	P0C0E4	278 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	JAK1	P23458	1154 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	CDKN1A	P38936	164 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	MAPK12	P53778	367 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	B3GALT5-AS1	P59052	145 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	ZNF415	Q09FC8	603 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	VWC2	Q2TAL6	325 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	SYT14P1	Q58G82	188 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	ELFN2	Q5R3F8	820 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	ARMC4	Q5T2S8	1044 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	KRT80	Q6KB66	452 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	MFSD12	Q6NUT3	480 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	ZBTB49	Q6ZSB9	765 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	MFSD6	Q6ZSS7	791 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	KLHDC8B	Q8IXV7	354 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	TTC30B	Q8N4P2	665 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	CNBD1	Q8NA66	436 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	NPEPL1	Q8NDH3	523 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	CCDC107	Q8WV48	283 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	SNRNP27	Q8WVK2	155 aa	Known RBP	3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	VPS33A	Q96AX1	596 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	ZNF501	Q96CX3	271 aa	Predicted RBP	3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	RMDN1	Q96DB5	314 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	FBXO17	Q96EF6	278 aa		3.88	□□□□□ -1.79
RBM39-231	ENST00000477334	HES6	Q96HZ4	224 aa		3.88	□□□□□ -1.79

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