RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ZNF554Q86TJ5 538 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 TRIML1Q8N9V2 468 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 SLC4A11Q8NBS3 891 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 OR1J1Q8NGS3 322 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 OR13J1Q8NGT2 312 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 DNASE2BQ8WZ79 361 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 RMDN1Q96DB5 314 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 OR10A4Q9H209 315 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 ARRDC1-AS1Q9H2J1 176 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 COQ3Q9NZJ6 369 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 B3GAT1Q9P2W7 334 aa4.57□□□□□ -1.68
PTCD3-211ENST00000476215 PLOD2O00469 737 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 TCERG1O14776 1098 aaKnown RBP4.56□□□□□ -1.68
PTCD3-211ENST00000476215 DKC1O60832 514 aaKnown RBP eCLIP4.56□□□□□ -1.68
PTCD3-211ENST00000476215 WDPCPO95876 746 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 TSHBP01222 138 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 APOA4P06727 396 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 IGHV4-38-2P0DP08 117 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 PTPN3P26045 913 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 RAB28P51157 221 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 PTPRCAPQ14761 206 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 VWC2Q2TAL6 325 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 ZC2HC1CQ53FD0 456 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-211ENST00000476215 CST9LP1Q5W188 147 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 KRT39Q6A163 491 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 SLC35E4Q6ICL7 350 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 FAM198BQ6UWH4 519 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 CEACAM20Q6UY09 585 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 RBMS3Q6XE24 437 aaKnown RBP4.56□□□□□ -1.68
PTCD3-211ENST00000476215 RBPMS2Q6ZRY4 209 aaKnown RBP4.56□□□□□ -1.68
PTCD3-211ENST00000476215 TMPRSS11BQ86T26 416 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 TRPT1Q86TN4 253 aaKnown RBP4.56□□□□□ -1.68
PTCD3-211ENST00000476215 OR10V1Q8NGI7 309 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 FGFBP3Q8TAT2 258 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 SSMEM1Q8WWF3 244 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 FCAMRQ8WWV6 532 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 ATL1Q8WXF7 558 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 MRPS27Q92552 414 aaKnown RBP4.56□□□□□ -1.68
PTCD3-211ENST00000476215 SYN2Q92777 582 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-211ENST00000476215 VPS33AQ96AX1 596 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 HDAC11Q96DB2 347 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 ARSGQ96EG1 525 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 NSL1Q96IY1 281 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 RADILQ96JH8 1075 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 CFAP57Q96MR6 1250 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 BAG1Q99933 345 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-211ENST00000476215 ANKRD2Q9GZV1 360 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 S1PR5Q9H228 398 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 SERINC1Q9NRX5 453 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 C5AR2Q9P296 337 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 MTUS1Q9ULD2 1270 aa4.56□□□□□ -1.68
PTCD3-211ENST00000476215 A0A087WYN8 130 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 A8MXE2 369 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 TRIM77I1YAP6 450 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 CLIC2O15247 247 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 CELF2O95319 508 aaKnown RBP4.55□□□□□ -1.68
PTCD3-211ENST00000476215 LIFP15018 202 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 TIMP3P35625 211 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 LGALS3BPQ08380 585 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 CAMK2DQ13557 499 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 C1orf141Q5JVX7 400 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 DCAF10Q5QP82 559 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 PLA2G4FQ68DD2 849 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-211ENST00000476215 ZBTB49Q6ZSB9 765 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 USP43Q70EL4 1123 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 XXYLT1Q8NBI6 393 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 CCDC107Q8WV48 283 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 IRGQQ8WZA9 623 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 HSD17B8Q92506 261 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 ZNF653Q96CK0 615 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 AP1M1Q9BXS5 423 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 Q9N2K0 584 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 A4GALTQ9NPC4 353 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 MYNNQ9NPC7 610 aa4.55□□□□□ -1.68
PTCD3-211ENST00000476215 ABT1Q9ULW3 272 aaKnown RBP4.55□□□□□ -1.68
PTCD3-211ENST00000476215 PCDH11YQ9BZA8 1340 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 PMS2P5A8MQ11 134 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 SMIM1B2RUZ4 78 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 FAM72CH0Y354 149 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 DNM1LO00429 736 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 RNASEH1O60930 286 aaKnown RBP4.54□□□□□ -1.68
PTCD3-211ENST00000476215 INHBAP08476 426 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 RAB40ALP0C0E4 278 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 SMIM18P0DKX4 95 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 ANOS1P23352 680 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 MPZP25189 248 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 MAPK12P53778 367 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 PHLDA2Q53GA4 152 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 KRBOX4Q5JUW0 171 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 ELFN2Q5R3F8 820 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 FAM72AQ5TYM5 149 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 FAM72DQ6L9T8 149 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 MFSD12Q6NUT3 480 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 DET1Q7L5Y6 550 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 CHST3Q7LGC8 479 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 ARHGAP22Q7Z5H3 698 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 ISCA2Q86U28 154 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 FAM72BQ86X60 149 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 PI4KAP1Q8N8J0 262 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms