RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 BOLA3Q53S33 107 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 CEP78Q5JTW2 689 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 PIK3CD-AS1Q5SR53 167 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 DCST1Q5T197 706 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 STRIP1Q5VSL9 837 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 PLEKHA7Q6IQ23 1121 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 MFSD12Q6NUT3 480 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 CYB5D1Q6P9G0 228 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 PCSK4Q6UW60 755 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 FAM198BQ6UWH4 519 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 C1orf186Q6ZWK4 172 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 ARMCX2Q7L311 632 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 PTF1AQ7RTS3 328 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 NRARPQ7Z6K4 114 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 UNC5CLQ8IV45 518 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 CNGA4Q8IV77 575 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 EMC1Q8N766 993 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 BANPQ8N9N5 519 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 FAM98AQ8NCA5 519 aaKnown RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 SLC44A5Q8NCS7 719 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 BBS10Q8TAM1 723 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 IGFBPL1Q8WX77 278 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 TMEM186Q96B77 213 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 SNRNP40Q96DI7 357 aaKnown RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 SGF29Q96ES7 293 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 DTNBP1Q96EV8 351 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 FAM81BQ96LP2 452 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 OR6C1Q96RD1 312 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 ERP44Q9BS26 406 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 NTPCRQ9BSD7 190 aaKnown RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 KRTAP4-8Q9BYQ9 185 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 S1PR5Q9H228 398 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 DPAGT1Q9H3H5 408 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 CUEDC2Q9H467 287 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 VPS37BQ9H9H4 285 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 RPF1Q9H9Y2 349 aaKnown RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 SEBOXQ9HB31 216 aaPredicted RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 MYNNQ9NPC7 610 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 EXTL2Q9UBQ6 330 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 SNX6Q9UNH7 406 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 PLA2G4CQ9UP65 541 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 ZNF541Q9H0D2 1346 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 SMIM35A0A1B0GVV1 85 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 STMND1H3BQB6 276 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 AP3B1O00203 1094 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 TLR4O00206 839 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 O00370 1275 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 PTGESO14684 152 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 ZNF217O75362 1048 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 OR6B1O95007 311 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 LATS1O95835 1130 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 OR2T7P0C7T2 308 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 DANCRP0C864 163 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 MYZAPP0CAP1 466 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 UGT1A6P19224 532 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 HRH2P25021 359 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 CERS1P27544 350 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 MPGP29372 298 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 CCND2P30279 289 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 DCTDP32321 178 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 HSPA1LP34931 641 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 HSD17B3P37058 310 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 AVPR1AP37288 418 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 MDH1P40925 334 aaKnown RBP4.05□□□□□ -1.76
VPS13D-207ENST00000476169 MAGEB1P43366 347 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 ME1P48163 572 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 SLC9A3P48764 834 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 TRPC1P48995 793 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 GBX2P52951 348 aaPredicted RBP4.05□□□□□ -1.76
VPS13D-207ENST00000476169 NUDT6P53370 316 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 CDH12P55289 794 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 MTCP1P56278 107 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 CSNK2A1P68400 391 aaPredicted RBP4.05□□□□□ -1.76
VPS13D-207ENST00000476169 CETN1Q12798 172 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 MVPQ14764 893 aaKnown RBP4.05□□□□□ -1.76
VPS13D-207ENST00000476169 RIPPLY2Q5TAB7 128 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 PAPD7Q5XG87 772 aaKnown RBP4.05□□□□□ -1.76
VPS13D-207ENST00000476169 ANKRD54Q6NXT1 300 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 TMEM71Q6P5X7 295 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 NOTUMQ6P988 496 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 TMPRSS11FQ6ZWK6 438 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 IRF2BP2Q7Z5L9 587 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 TAF8Q7Z7C8 310 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 ADAMTSL2Q86TH1 951 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 PALB2Q86YC2 1186 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 CSNK2A3Q8NEV1 391 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 ARRDC2Q8TBH0 407 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 ARHGAP45Q92619 1136 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 SLC25A28Q96A46 364 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 TMEM18Q96B42 140 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 LINGO1Q96FE5 620 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 SIGLEC11Q96RL6 698 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 ZNF559Q9BR84 538 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 FAM213AQ9BRX8 229 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 NAPBQ9H115 298 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 WDR26Q9H7D7 661 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 ZCCHC3Q9NUD5 404 aaKnown RBP4.05□□□□□ -1.76
VPS13D-207ENST00000476169 TMEM184CQ9NVA4 438 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 SLCO1C1Q9NYB5 712 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 NDUFA13Q9P0J0 144 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms