RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 STN1Q9H668 368 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 GAREM1Q9H706 876 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 PARVBQ9HBI1 364 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CD84Q9UIB8 345 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CNOT6Q9ULM6 557 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 RNF112Q9ULX5 631 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 GOLGA8QA0A0J9YX86 632 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 GOLGA8OA6NCC3 632 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 METTL12A8MUP2 240 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 FADS2P1A8MWK0 482 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 TCP11X1B4DZS4 312 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 TARM1B6A8C7 271 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 GOLGA8NF8WBI6 632 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 GFYI3L273 518 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 IFRD1O00458 451 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 NDUFAB1O14561 156 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 BCAT2O15382 392 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 SPINT1O43278 529 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 GRID2O43424 1007 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 KLK8O60259 260 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 DNAJC6O75061 913 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 KATNA1O75449 491 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 DKK1O94907 266 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 ZIC2O95409 532 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 MLYCDO95822 493 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 CATP04040 527 aaKnown RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 ANXA5P08758 320 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 NDUFS1P28331 727 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 SLC1A6P48664 564 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 KIAA1024LP59773 190 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 DMPKQ09013 629 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 CDC16Q13042 620 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 PRKAA1Q13131 559 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 PTPRRQ15256 657 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 HLA-BQ31612 363 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 ANKS6Q68DC2 871 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 CYHR1Q6ZMK1 362 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 CDHR3Q6ZTQ4 885 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 FRA10AC1Q70Z53 315 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 ADGRG6Q86SQ4 1221 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 CENPLQ8N0S6 344 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 PLD6Q8N2A8 252 aaKnown RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 TMEM151AQ8N4L1 468 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 CLDN19Q8N6F1 224 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 RASGEF1AQ8N9B8 481 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 AVL9Q8NBF6 648 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 TP53I13Q8NBR0 393 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 LSM14AQ8ND56 463 aaKnown RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 BAHD1Q8TBE0 780 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 HM13Q8TCT9 377 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 CD200R1Q8TD46 325 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 EEF1AKMT1Q8WVE0 214 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 KCTD4Q8WVF5 259 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 ZFPM2Q8WW38 1151 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 STON2Q8WXE9 905 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 ASB11Q8WXH4 323 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 ELMO1Q92556 727 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 GLMNQ92990 594 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 L3HYPDHQ96EM0 354 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 SGF29Q96ES7 293 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 LINGO1Q96FE5 620 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 SCARF2Q96GP6 870 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 CCDC138Q96M89 665 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 TIMM29Q9BSF4 260 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 GPR174Q9BXC1 333 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 C1QTNF3Q9BXJ4 246 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 DRC3Q9H069 523 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 SLC6A17Q9H1V8 727 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 IL21RQ9HBE5 538 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 SARS2Q9NP81 518 aaKnown RBP6.87□□□□□ -1.31
SHQ1-207ENST00000475558 NUDT4Q9NZJ9 180 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 KLHL14Q9P2G3 628 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 SLC17A7Q9P2U7 560 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 POLG2Q9UHN1 485 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 LNPEPQ9UIQ6 1025 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 SLC17A4Q9Y2C5 497 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 OARD1Q9Y530 152 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 HEBP2Q9Y5Z4 205 aa6.87□□□□□ -1.31
SHQ1-207ENST00000475558 CELSR3Q9NYQ7 3312 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 ASH1LQ9NR48 2969 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 NYNRINQ9P2P1 1898 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 A0A1W2PPC4 97 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 SLC5A10A0PJK1 596 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 WDR91A4D1P6 747 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 OR5K4A6NMS3 321 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 C10orf142B7Z368 130 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 G3V2L1 256 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 H3BM21 787 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 BTN3A1O00481 513 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 TNFSF14O43557 240 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 EDF1O60869 148 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 NIPSNAP2O75323 286 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 MATN4O95460 622 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 TNFP01375 233 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 FGF4P08620 206 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 GFAPP14136 432 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 SLC2A4P14672 509 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 GM2AP17900 193 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 IDSP22304 550 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms