RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ANKUB1A6NFN9 424 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 ENTPD3O75355 529 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 EIF2DP41214 584 aaKnown RBP5.69□□□□□ -1.5
SMC5-203ENST00000475540 BMXP51813 675 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 SNRPD1P62314 119 aaKnown RBP5.69□□□□□ -1.5
SMC5-203ENST00000475540 IRX1P78414 480 aaPredicted RBP5.69□□□□□ -1.5
SMC5-203ENST00000475540 STK4Q13043 487 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 P2RY6Q15077 328 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 TEAD2Q15562 447 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 ZNF772Q68DY9 489 aaPredicted RBP5.69□□□□□ -1.5
SMC5-203ENST00000475540 KRTAP7-1Q8IUC3 87 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 CFAP206Q8IYR0 622 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 ZNF843Q8N446 348 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 TRIML1Q8N9V2 468 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 OR13J1Q8NGT2 312 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 OLIG1Q8TAK6 271 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 PRPF31Q8WWY3 499 aaKnown RBP5.69□□□□□ -1.5
SMC5-203ENST00000475540 IRGQQ8WZA9 623 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 EGLN1Q9GZT9 426 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 LAT2Q9GZY6 243 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 NSMCE4AQ9NXX6 385 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 CACNG5Q9UF02 275 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 PCDHGB4Q9UN71 923 aa5.69□□□□□ -1.5
SMC5-203ENST00000475540 WBP11Q9Y2W2 641 aaKnown RBP5.69□□□□□ -1.5
SMC5-203ENST00000475540 A0A087WW49 117 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 ANTXRLA6NF34 631 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 A8MV72 311 aaPredicted RBP5.68□□□□□ -1.5
SMC5-203ENST00000475540 RNASEH1O60930 286 aaKnown RBP5.68□□□□□ -1.5
SMC5-203ENST00000475540 CEBPBP17676 345 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 CA4P22748 312 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 PSMC6P62333 389 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 TEX38Q6PEX7 206 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 ZNF497Q6ZNH5 498 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 TMPRSS11FQ6ZWK6 438 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 ADIPOR2Q86V24 386 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 MAPKAPK5-AS1Q8N8E1 139 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 GPATCH11Q8N954 259 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 FGFBP3Q8TAT2 258 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 HPSE2Q8WWQ2 592 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 SUSD6Q92537 303 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 LPGAT1Q92604 370 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 LINC00479Q96M42 142 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 MS4A10Q96PG2 267 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 S1PR5Q9H228 398 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 SDR39U1Q9NRG7 319 aaPredicted RBP5.68□□□□□ -1.5
SMC5-203ENST00000475540 MRPL15Q9P015 296 aaKnown RBP5.68□□□□□ -1.5
SMC5-203ENST00000475540 STK26Q9P289 416 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 RASAL2Q9UJF2 1139 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 MTUS1Q9ULD2 1270 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 PYGO1Q9Y3Y4 419 aa5.68□□□□□ -1.5
SMC5-203ENST00000475540 CCER2I3L3R5 266 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 ARHGEF9O43307 516 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 GFPT2O94808 682 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 RAF1P04049 648 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 OR2T7P0C7T2 308 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 CA6P23280 308 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 LUMP51884 338 aaPredicted RBP5.67□□□□□ -1.5
SMC5-203ENST00000475540 HERV-K104P61576 105 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 SP3Q02447 781 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 PPARDQ03181 441 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 BHLHB9Q6PI77 547 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 LINC00346Q8IVM7 164 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 CEP57L1Q8IYX8 460 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 MINDY1Q8N5J2 469 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 TMEM178AQ8NBL3 297 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 KBTBD8Q8NFY9 601 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 CCDC107Q8WV48 283 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 ZNF622Q969S3 477 aaKnown RBP eCLIP5.67□□□□□ -1.5
SMC5-203ENST00000475540 ZNF653Q96CK0 615 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 ZNF599Q96NL3 588 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 OPRPNQ99935 248 aaPredicted RBP5.67□□□□□ -1.5
SMC5-203ENST00000475540 MRPL1Q9BYD6 325 aaKnown RBP5.67□□□□□ -1.5
SMC5-203ENST00000475540 PITPNM3Q9BZ71 974 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 ERVMER34-1Q9H9K5 563 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 TBC1D17Q9HA65 648 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 ZNF701Q9NV72 531 aaPredicted RBP5.67□□□□□ -1.5
SMC5-203ENST00000475540 B3GAT1Q9P2W7 334 aa5.67□□□□□ -1.5
SMC5-203ENST00000475540 A0A1B0GU03 582 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 ANKRD61A6NGH8 418 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 KLF11O14901 512 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 CDC123O75794 336 aaPredicted RBP5.66□□□□□ -1.5
SMC5-203ENST00000475540 BEST1O76090 585 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 MAGEA11P43364 429 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 POU5F1Q01860 360 aaKnown RBP5.66□□□□□ -1.5
SMC5-203ENST00000475540 BAATQ14032 418 aaPredicted RBP5.66□□□□□ -1.5
SMC5-203ENST00000475540 ADAMTSL4-AS1Q5T5F5 129 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 TMEM211Q6ICI0 200 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 CFAP161Q6P656 301 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 TMEM139Q8IV31 216 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 ARHGAP24Q8N264 748 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 MAGED4Q96JG8 741 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 OPA3Q9H6K4 179 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 PDE7BQ9NP56 450 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMC5-203ENST00000475540 TUBE1Q9UJT0 475 aa5.66□□□□□ -1.5
SMC5-203ENST00000475540 WDPCPO95876 746 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 ACTN2P35609 894 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 LMAN1P49257 510 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 PRKG2Q13237 762 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms