RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 AGAP14A8MT82 685 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 H3BMH7 237 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 SGTAO43765 313 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 ANXA9O76027 345 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 CRTAMO95727 393 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 PTGER4P35408 488 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 SLC1A1P43005 524 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 GEMP55040 296 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 ART3Q13508 389 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 BOP1Q14137 746 aaKnown RBP12.15□□□□□ -0.46
SKA3-206ENST00000475251 SLC9A5Q14940 896 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 SLC18A3Q16572 532 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 HIF1AQ16665 826 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 DEFB110Q30KQ9 67 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 GDF7Q7Z4P5 450 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 SNX20Q7Z614 316 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 ZNF567Q8N184 647 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 NXPE1Q8N323 547 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 LILRA3Q8N6C8 439 aaPredicted RBP12.15□□□□□ -0.46
SKA3-206ENST00000475251 ZNF655Q8N720 491 aaPredicted RBP12.15□□□□□ -0.46
SKA3-206ENST00000475251 BCORP1Q8N888 145 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 TFGQ92734 400 aaPredicted RBP12.15□□□□□ -0.46
SKA3-206ENST00000475251 P3H4Q92791 437 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 OXNAD1Q96HP4 312 aaPredicted RBP12.15□□□□□ -0.46
SKA3-206ENST00000475251 FERMT1Q9BQL6 677 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 HGH1Q9BTY7 390 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 WDR54Q9H977 334 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 SLC6A20Q9NP91 592 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 OLAHQ9NV23 265 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 DHCR7Q9UBM7 475 aaKnown RBP12.15□□□□□ -0.46
SKA3-206ENST00000475251 POLG2Q9UHN1 485 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 FKBPLQ9UIM3 349 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 CDC23Q9UJX2 597 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 NENFQ9UMX5 172 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 PLCL2Q9UPR0 1127 aa12.15□□□□□ -0.46
SKA3-206ENST00000475251 NUP210LQ5VU65 1888 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 POLEQ07864 2286 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 SEC16AO15027 2179 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 A0A0J9YY10 115 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 CST8O60676 142 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 ALBP02768 609 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 UMODP07911 640 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 UGT2B7P16662 529 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 ITGAXP20702 1163 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 GRNP28799 593 aaKnown RBP12.14□□□□□ -0.47
SKA3-206ENST00000475251 ARSFP54793 590 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 OTUD4Q01804 1114 aaKnown RBP12.14□□□□□ -0.47
SKA3-206ENST00000475251 PRKG2Q13237 762 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 PTPRCAPQ14761 206 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 SLC5A12Q1EHB4 618 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 GPR33Q49SQ1 333 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 ITPRIPL1Q6GPH6 555 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 RPUSD3Q6P087 351 aaKnown RBP12.14□□□□□ -0.47
SKA3-206ENST00000475251 FJX1Q86VR8 437 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 RHOT2Q8IXI1 618 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 SLC35G2Q8TBE7 412 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 LRRC45Q96CN5 670 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 SLX1AQ9BQ83 275 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 PACSIN1Q9BY11 444 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 LHPPQ9H008 270 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 SPRTNQ9H040 489 aaPredicted RBP12.14□□□□□ -0.47
SKA3-206ENST00000475251 XKR8Q9H6D3 395 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 CHST11Q9NPF2 352 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 OR6C2Q9NZP2 312 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 SUCOQ9UBS9 1254 aaKnown RBP12.14□□□□□ -0.47
SKA3-206ENST00000475251 FBXL4Q9UKA2 621 aa12.14□□□□□ -0.47
SKA3-206ENST00000475251 NXT1Q9UKK6 140 aaKnown RBP12.14□□□□□ -0.47
SKA3-206ENST00000475251 HACD1B0YJ81 288 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 QSOX1O00391 747 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 LIN7AO14910 233 aaPredicted RBP12.13□□□□□ -0.47
SKA3-206ENST00000475251 JRKO75564 520 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 ALAS2P22557 587 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 PBX1P40424 430 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 CDKN2BP42772 138 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 GABRA4P48169 554 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 UBASH3AP57075 661 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 INAQ16352 499 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 TUBB8Q3ZCM7 444 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 MTFR2Q6P444 385 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 MFSD7Q6UXD7 560 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 ISLR2Q6UXK2 745 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 ZC3H18Q86VM9 953 aaKnown RBP12.13□□□□□ -0.47
SKA3-206ENST00000475251 PARP9Q8IXQ6 854 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 TBC1D21Q8IYX1 336 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 PHC3Q8NDX5 983 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 NAT14Q8WUY8 206 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 RELTQ969Z4 430 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 OR2A14Q96R47 310 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 ZDHHC3Q9NYG2 299 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 SAE1Q9UBE0 346 aaPredicted RBP12.13□□□□□ -0.47
SKA3-206ENST00000475251 ICKQ9UPZ9 632 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 AAR2Q9Y312 384 aaKnown RBP12.13□□□□□ -0.47
SKA3-206ENST00000475251 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.13□□□□□ -0.47
SKA3-206ENST00000475251 CSAG2Q9Y5P2 127 aa12.13□□□□□ -0.47
SKA3-206ENST00000475251 ANKRD17O75179 2603 aaKnown RBP12.13□□□□□ -0.47
SKA3-206ENST00000475251 A0A1B0GX78 115 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 MASP2O00187 686 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 SPOPO43791 374 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms