RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 SHMT2P34897 504 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 ABCG1P45844 678 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 ABRQ12979 859 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 ZKSCAN8Q15776 578 aaPredicted RBP16.44■□□□□ 0.22
SCAF11-206ENST00000474828 KLHL38Q2WGJ6 581 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 GRTP1Q5TC63 336 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 PAQR3Q6TCH7 311 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 CAPN12Q6ZSI9 719 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 TRMT10CQ7L0Y3 403 aaKnown RBP16.44■□□□□ 0.22
SCAF11-206ENST00000474828 AMIGO1Q86WK6 493 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 FLVCR1-AS1Q8TAF5 88 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 LCN9Q8WX39 176 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 KLHL6Q8WZ60 621 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 NCSTNQ92542 709 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 RAD51AP1Q96B01 352 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 FAM136AQ96C01 138 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 CCDC74BQ96LY2 380 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 CYTH2Q99418 400 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 TRMT6Q9UJA5 497 aaKnown RBP16.44■□□□□ 0.22
SCAF11-206ENST00000474828 NFS1Q9Y697 457 aa16.44■□□□□ 0.22
SCAF11-206ENST00000474828 CHD8Q9HCK8 2581 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 FAM95CA0A1B0GW59 222 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 TRABD2BA6NFA1 517 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 MYO1CO00159 1063 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 BTN3A3O00478 584 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 CAPN5O15484 640 aaPredicted RBP16.43■□□□□ 0.22
SCAF11-206ENST00000474828 KDM1AO60341 852 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 PIAS1O75925 651 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 FAM153BP0C7A2 387 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 MYBL2P10244 700 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 TYRP1P17643 537 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 AMD1P17707 334 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 PKLRP30613 574 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 PHBP35232 272 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 RAB28P51157 221 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 GFERP55789 205 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 TAS2R39P59534 338 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 POU4F1Q01851 419 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 KRT33BQ14525 404 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 C16orf72Q14CZ0 275 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 FAM153CQ494X1 144 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 TMEM207Q6UWW9 146 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 OOSP2Q86WS3 158 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 CPNE9Q8IYJ1 553 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 BMPERQ8N8U9 685 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 WDR36Q8NI36 951 aaKnown RBP16.43■□□□□ 0.22
SCAF11-206ENST00000474828 ZDHHC12Q96GR4 267 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 HGH1Q9BTY7 390 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 PITPNM3Q9BZ71 974 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 STRADBQ9C0K7 418 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 EPB41L4BQ9H329 900 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 SRMSQ9H3Y6 488 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 POLR1BQ9H9Y6 1135 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 HRASLS2Q9NWW9 162 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.43■□□□□ 0.22
SCAF11-206ENST00000474828 POMT2Q9UKY4 750 aa16.43■□□□□ 0.22
SCAF11-206ENST00000474828 KMT2BQ9UMN6 2715 aaPredicted RBP16.43■□□□□ 0.22
SCAF11-206ENST00000474828 HMX2A2RU54 273 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 RASGRF2O14827 1237 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 PRICKLE3O43900 615 aaPredicted RBP16.42■□□□□ 0.22
SCAF11-206ENST00000474828 ZNF37AP17032 561 aaPredicted RBP16.42■□□□□ 0.22
SCAF11-206ENST00000474828 PRKG2Q13237 762 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 PLCL1Q15111 1095 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 CYP2A13Q16696 494 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.42■□□□□ 0.22
SCAF11-206ENST00000474828 TEX35Q5T0J7 233 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 WDR93Q6P2C0 686 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 LINC01555Q8NAE3 123 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 OR4E2Q8NGC2 313 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 MAGEC3Q8TD91 643 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 DENND1AQ8TEH3 1009 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 EEF1AKMT1Q8WVE0 214 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 SLC41A2Q96JW4 573 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 FOPNLQ96NB1 174 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 NRTNQ99748 197 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 RAB11FIP5Q9BXF6 653 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 CHRNA10Q9GZZ6 450 aa16.42■□□□□ 0.22
SCAF11-206ENST00000474828 ZNF768Q9H5H4 540 aaKnown RBP16.42■□□□□ 0.22
SCAF11-206ENST00000474828 SIDT1Q9NXL6 827 aaKnown RBP16.42■□□□□ 0.22
SCAF11-206ENST00000474828 MTO1Q9Y2Z2 717 aaKnown RBP16.42■□□□□ 0.22
SCAF11-206ENST00000474828 OR6C74A6NCV1 312 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 TLCD2A6NGC4 264 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 ARHGEF33A8MVX0 844 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 BTN3A1O00481 513 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 PLD2O14939 933 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 SLC16A5O15375 505 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 MSL3P1P0C860 447 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 MCM3P25205 808 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 SPRP35270 261 aaPredicted RBP16.41■□□□□ 0.22
SCAF11-206ENST00000474828 RGS4P49798 205 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 IL2P60568 153 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 PPP1CAP62136 330 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 SP140Q13342 867 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 ARHGAP19Q14CB8 494 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 CCSMST1Q4G0I0 132 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 RAB11FIP2Q7L804 512 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 KMT5CQ86Y97 462 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 SPNS2Q8IVW8 549 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 CEP97Q8IW35 865 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 LSMEM2Q8N112 164 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms