RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CCDC181Q5TID7 509 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 MICALCLQ6ZW33 695 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 SNX20Q7Z614 316 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 SRRM1Q8IYB3 904 aaKnown RBP13.52□□□□□ -0.25
CCDC78-209ENST00000474647 ZNF655Q8N720 491 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-209ENST00000474647 OR2Y1Q8NGV0 311 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 TFGQ92734 400 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-209ENST00000474647 FERMT1Q9BQL6 677 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 HEMGNQ9BXL5 484 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 SPRTNQ9H040 489 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-209ENST00000474647 ZNF552Q9H707 407 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-209ENST00000474647 ZBTB20Q9HC78 741 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-209ENST00000474647 ABHD10Q9NUJ1 306 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 ICKQ9UPZ9 632 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 NTNG1Q9Y2I2 539 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 AP1M2Q9Y6Q5 423 aa13.52□□□□□ -0.25
CCDC78-209ENST00000474647 MYO7BQ6PIF6 2116 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 AGAP14A8MT82 685 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 ZSCAN9O15535 394 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-209ENST00000474647 HCRTR1O43613 425 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 ALOX12BO75342 701 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 TPM1P09493 284 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 ITGA3P26006 1051 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 CD151P48509 253 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 MARCKSL1P49006 195 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 CDKN1CP49918 316 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-209ENST00000474647 ZNF140P52738 457 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-209ENST00000474647 DCDP81605 110 aaKnown RBP13.51□□□□□ -0.25
CCDC78-209ENST00000474647 PRPSAP1Q14558 356 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 RHBDD2Q6NTF9 364 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 IGFL3Q6UXB1 125 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 TAS2R42Q7RTR8 314 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 CUZD1Q86UP6 607 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 OR5AR1Q8NGP9 310 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 PROKR1Q8TCW9 393 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 HEXDCQ8WVB3 486 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 UBE2Q2Q8WVN8 375 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC78-209ENST00000474647 GBP5Q96PP8 586 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 AP1M1Q9BXS5 423 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 AGPAT4Q9NRZ5 378 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 ZDHHC3Q9NYG2 299 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 TDRKHQ9Y2W6 561 aaKnown RBP13.51□□□□□ -0.25
CCDC78-209ENST00000474647 AAR2Q9Y312 384 aaKnown RBP13.51□□□□□ -0.25
CCDC78-209ENST00000474647 PCDHGA10Q9Y5H3 936 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 POLEQ07864 2286 aa13.51□□□□□ -0.25
CCDC78-209ENST00000474647 CNOT3O75175 753 aaKnown RBP13.5□□□□□ -0.25
CCDC78-209ENST00000474647 ZRANB2O95218 330 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCDC78-209ENST00000474647 CTSBP07858 339 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 CD63P08962 238 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 PRSS56P0CW18 603 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 ACRV1P26436 265 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 TNFRSF8P28908 595 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 SHMT2P34897 504 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 ADRA1AP35348 466 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 BRD3Q15059 726 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 ZIC1Q15915 447 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 HIF1AQ16665 826 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 C1QL3Q5VWW1 255 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 RANBP10Q6VN20 620 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 UNC5AQ6ZN44 842 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 PPP1R32Q7Z5V6 425 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 SERPINA9Q86WD7 417 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 TMEM151BQ8IW70 566 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 KATNAL2Q8IYT4 538 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 CLDN19Q8N6F1 224 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 PTERQ96BW5 349 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 DNAJC1Q96KC8 554 aaKnown RBP13.5□□□□□ -0.25
CCDC78-209ENST00000474647 TBL1YQ9BQ87 522 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 NDC1Q9BTX1 674 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 ATP13A2Q9NQ11 1180 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 PLAGL1Q9UM63 463 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 SRPK3Q9UPE1 567 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 ASF1AQ9Y294 204 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 CSAG2Q9Y5P2 127 aa13.5□□□□□ -0.25
CCDC78-209ENST00000474647 A0A0J9YY10 115 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 ISM1B1AKI9 464 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 H3BMH7 237 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 APOC4-APOC2K7ER74 178 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 AGPSO00116 658 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 KCNN4O15554 427 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 APOC2P02655 101 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 CHRM5P08912 532 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-209ENST00000474647 CTNNA2P26232 953 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 RPA4Q13156 261 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 TBX2Q13207 712 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-209ENST00000474647 SPARCL1Q14515 664 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 GPR33Q49SQ1 333 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 NKAIN1Q4KMZ8 207 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 ANKRD20A2Q5SQ80 823 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 ANKRD20A1Q5TYW2 823 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 ANKRD20A3Q5VUR7 823 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 Q6ZS92 163 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 TICAM1Q8IUC6 712 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 RCOR2Q8IZ40 523 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 ST6GALNAC3Q8NDV1 305 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 CNDP1Q96KN2 507 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 OR2A14Q96R47 310 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 FAM118BQ9BPY3 351 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 WDR77Q9BQA1 342 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms