RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 POLR2LP62875 67 aaKnown RBP4.05□□□□□ -1.76
BRCA1-212ENST00000473961 AP1B1Q10567 949 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 ZNF155Q12901 538 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-212ENST00000473961 KLF9Q13886 244 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-212ENST00000473961 GTF2H2Q13888 395 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 SMC1AQ14683 1233 aaKnown RBP4.05□□□□□ -1.76
BRCA1-212ENST00000473961 ETFDHQ16134 617 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 ODF3L2Q3SX64 289 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 LEXMQ3ZCV2 418 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 MDH1BQ5I0G3 518 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 CCDC158Q5M9N0 1113 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 ELFN2Q5R3F8 820 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 GTF2H2CQ6P1K8 395 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 ATG9AQ7Z3C6 839 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 TECPR1Q7Z6L1 1165 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 DSG4Q86SJ6 1040 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 AMIGO1Q86WK6 493 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 NUDT13Q86X67 352 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 SFR1Q86XK3 245 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 KMT5CQ86Y97 462 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 C1orf87Q8N0U7 546 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 NRACQ8N912 160 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 ZFAND2BQ8WV99 257 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 RAD54LQ92698 747 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 OXNAD1Q96HP4 312 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-212ENST00000473961 CDHR1Q96JP9 859 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 AK8Q96MA6 479 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 NTPCRQ9BSD7 190 aaKnown RBP4.05□□□□□ -1.76
BRCA1-212ENST00000473961 SEZ6LQ9BYH1 1024 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 SLC5A7Q9GZV3 580 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 SPRTNQ9H040 489 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-212ENST00000473961 MIS12Q9H081 205 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 UBTD1Q9HAC8 227 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 MID1IP1Q9NPA3 183 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 TMEM30AQ9NV96 361 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 SPHK1Q9NYA1 384 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 TRPC4Q9UBN4 977 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 FBXL5Q9UKA1 691 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 POU2F3Q9UKI9 436 aa4.05□□□□□ -1.76
BRCA1-212ENST00000473961 IGLV5-52A0A0A0MRZ9 124 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 C13orf42A0A1B0GVH6 325 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 C5orf52A6NGY3 159 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 MYMKA6NI61 221 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 FAM86B1E9PN63 330 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 PGRMC2O15173 223 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 EIF3DO15371 548 aaKnown RBP eCLIP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 RNASEH1O60930 286 aaKnown RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 KERAO60938 352 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 RAD51DO75771 328 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 KDM4BO94953 1096 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 ACSL3O95573 720 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 CRYABP02511 175 aaKnown RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 SNRNP70P08621 437 aaKnown RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 KRT19P08727 400 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 FAM86B2P0C5J1 330 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 EPCAMP16422 314 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 ITIH1P19827 911 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 CD22P20273 847 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 CASP3P42574 277 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 RGS7P49802 495 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 MMP15P51511 669 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 HNRNPKP61978 463 aaKnown RBP eCLIP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 EGR4Q05215 589 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 TROAPQ12815 778 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 MYBPHQ13203 477 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 TNK1Q13470 666 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 ITGA7Q13683 1181 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 DUOXA1Q1HG43 343 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 TTC31Q49AM3 519 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 GRTP1Q5TC63 336 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 IRAK1BP1Q5VVH5 260 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 TXNRD3NBQ6F5E7 133 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 OR7E24Q6IFN5 339 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 RHBDF2Q6PJF5 856 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 LONP2Q86WA8 852 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 PTOV1Q86YD1 416 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 CREBRFQ8IUR6 639 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 FOXP4Q8IVH2 680 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 SIAH3Q8IW03 269 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 FAM114A1Q8IWE2 563 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 CFAP206Q8IYR0 622 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 MUC20Q8N307 709 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 PGBD5Q8N414 524 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 L3MBTL4Q8NA19 623 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 OR8H1Q8NGG4 311 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 OR5M8Q8NGP6 311 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 B4GALNT2Q8NHY0 566 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 KRT35Q92764 455 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 ABTB1Q969K4 478 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 DHX58Q96C10 678 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 BSCL2Q96G97 398 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 CABS1Q96KC9 395 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 SGK494Q96LW2 274 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 MYADMQ96S97 322 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 HNRNPABQ99729 332 aaKnown RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 SNX25Q9H3E2 840 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 MINDY3Q9H8M7 445 aa4.04□□□□□ -1.76
BRCA1-212ENST00000473961 MRPL44Q9H9J2 332 aaKnown RBP4.04□□□□□ -1.76
BRCA1-212ENST00000473961 OLFML3Q9NRN5 406 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms