RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CDK2AP1O14519 115 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TBX1O43435 398 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 LRP3O75074 770 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 MAP3K6O95382 1288 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 AP2A1O95782 977 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 NPPAP01160 153 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 RHOP08100 348 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 POU2F2P09086 479 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 MSL3P1P0C860 447 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 SPNP16150 400 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CEBPBP17676 345 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 PSMB4P28070 264 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 OR1D2P34982 312 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 ARL1P40616 181 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 HTR3AP46098 478 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TKTL1P51854 596 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CXCR4P61073 352 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 EMX1Q04741 257 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 MBTD1Q05BQ5 628 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CD47Q08722 323 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 GRIK2Q13002 908 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TRAF3Q13114 568 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TARDBPQ13148 414 aaKnown RBP eCLIP9.91□□□□□ -0.82
APTX-216ENST00000472896 RAB33AQ14088 237 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 EMC2Q15006 297 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 IMPG1Q17R60 797 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 RFX4Q33E94 735 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 BSPRYQ5W0U4 402 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 ZNF470Q6ECI4 717 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 XKRXQ6PP77 449 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CES3Q6UWW8 571 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 ZDHHC13Q8IUH4 622 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 DCP1BQ8IZD4 617 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 SLC38A6Q8IZM9 456 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CENPLQ8N0S6 344 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 METTL4Q8N3J2 472 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 SETD6Q8TBK2 473 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 PIK3R3Q92569 461 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 BIRC7Q96CA5 298 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 MOCOSQ96EN8 888 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TMEM176AQ96HP8 235 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 REXO5Q96IC2 774 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 VPS35Q96QK1 796 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TWNKQ96RR1 684 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 RBM4BQ9BQ04 359 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 AIFM2Q9BRQ8 373 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 SLC39A3Q9BRY0 314 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 TARS2Q9BW92 718 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 RBM4Q9BWF3 364 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 NXF2Q9GZY0 626 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 OSBPL2Q9H1P3 480 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 CCNB1IP1Q9NPC3 277 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 ATP13A2Q9NQ11 1180 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 IARS2Q9NSE4 1012 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 MAGEL2Q9UJ55 1249 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 INTS6Q9UL03 887 aaKnown RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 MKLN1Q9UL63 735 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 MAGED2Q9UNF1 606 aaPredicted RBP9.91□□□□□ -0.82
APTX-216ENST00000472896 HSPE1-MOB4S4R3N1 261 aa9.91□□□□□ -0.82
APTX-216ENST00000472896 SDK1Q7Z5N4 2213 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 HMX3A6NHT5 357 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 INO80B-WBP1J3KQ70 363 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 UPK1AO00322 258 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 MED26O95402 600 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 RAP2AP10114 183 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 STMN1P16949 149 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 HOXB6P17509 224 aaKnown RBP9.9□□□□□ -0.82
APTX-216ENST00000472896 JUNDP17535 347 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 CTRB1P17538 263 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 S100A5P33763 92 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 CD68P34810 354 aaPredicted RBP9.9□□□□□ -0.82
APTX-216ENST00000472896 ETV3P41162 512 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 VBP1P61758 197 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 SHC2P98077 582 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 LIPEQ05469 1076 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 CARTPTQ16568 116 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 MEP1AQ16819 746 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 PPP1R3AQ16821 1122 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 KIF19Q2TAC6 998 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 FAM98BQ52LJ0 330 aaKnown RBP9.9□□□□□ -0.82
APTX-216ENST00000472896 ZNF667Q5HYK9 610 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 ZC3H12BQ5HYM0 836 aaKnown RBP9.9□□□□□ -0.82
APTX-216ENST00000472896 FAM78AQ5JUQ0 283 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 FAM182AQ5T1J6 154 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 OTUD3Q5T2D3 398 aaPredicted RBP9.9□□□□□ -0.82
APTX-216ENST00000472896 ZNF691Q5VV52 312 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 CTRB2Q6GPI1 263 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 SCARA5Q6ZMJ2 495 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 GDPD3Q7L5L3 318 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 VN1R5Q7Z5H4 357 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 ZDHHC17Q8IUH5 632 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 NATD1Q8N6N6 113 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 TXNDC5Q8NBS9 432 aaKnown RBP9.9□□□□□ -0.82
APTX-216ENST00000472896 SETD9Q8NE22 299 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 OR52K1Q8NGK4 314 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 TMBIM1Q969X1 311 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 ELSPBP1Q96BH3 223 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 LGALS12Q96DT0 336 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 ZHX1-C8orf76Q96EF9 292 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms